CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

plastid 2
cytosol 1
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92282	Soybean	plasma membrane	56.55	68.34
CDY45981	Canola	golgi, plasma membrane, vacuole	27.16	55.19
KRH07852	Soybean	golgi, plasma membrane, vacuole	20.13	54.78
KRG92281	Soybean	plasma membrane	70.61	54.03
KRH34529	Soybean	golgi, plasma membrane	65.5	51.25
KRH56032	Soybean	extracellular, golgi, plasma membrane	14.06	36.07
KRH48800	Soybean	plasma membrane	45.05	33.73
KRH66552	Soybean	plasma membrane	44.73	33.02
KRH48798	Soybean	plasma membrane	43.77	32.78
CDX87589	Canola	golgi, plasma membrane, vacuole	38.02	30.59
Bra015736.1-P	Field mustard	golgi, plasma membrane, vacuole	38.02	30.59
CDY29492	Canola	plasma membrane	37.06	30.29
CDY20402	Canola	endoplasmic reticulum, plasma membrane, vacuole	37.38	30.23
KRH39386	Soybean	golgi, plasma membrane, vacuole	39.94	30.19
CDX85953	Canola	endoplasmic reticulum, plasma membrane, vacuole	35.14	30.14
GSMUA_Achr3P03690_001	Banana	plasma membrane	40.58	30.09
CDX68094	Canola	endoplasmic reticulum, plasma membrane, vacuole	37.06	29.9
Bra003716.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	37.06	29.9
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	37.7	29.65
AT1G76520.2	Thale cress	plasma membrane	36.42	29.23
KRH07859	Soybean	golgi, plasma membrane, vacuole	37.7	28.5
KRH76489	Soybean	endoplasmic reticulum, plasma membrane, vacuole	37.7	28.43
KRH28961	Soybean	golgi, plasma membrane, vacuole	36.42	27.47
AT1G76530.1	Thale cress	plasma membrane	35.46	26.75
TraesCS5D01G275200.1	Wheat	plasma membrane	26.2	26.54
KXG35918	Sorghum	plasma membrane	34.82	26.33
EER99101	Sorghum	golgi, plasma membrane, vacuole	34.19	25.85
EER99100	Sorghum	golgi, plasma membrane, vacuole	33.87	25.6
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	33.23	25.3
AT1G20925.1	Thale cress	plasma membrane	37.38	24.79
Bra025857.1-P	Field mustard	plasma membrane	30.99	24.07
KRG89678	Soybean	plasma membrane	15.34	24.0
CDY31514	Canola	mitochondrion, plasma membrane	36.42	23.85
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	28.11	23.22
KRH39407	Soybean	endoplasmic reticulum, plasma membrane, vacuole	27.48	21.03
KRH28941	Soybean	plasma membrane	27.8	20.76
KRH76521	Soybean	plasma membrane	27.8	20.76
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	23.96	19.89
HORVU5Hr1G073670.1	Barley	cytosol	33.23	19.4
KRH38174	Soybean	plasma membrane	24.28	17.27
KRH40632	Soybean	plasma membrane	22.68	17.15
KRH00524	Soybean	plasma membrane	22.68	17.15
KRG94282	Soybean	plasma membrane	23.96	16.85
KRH07851	Soybean	plasma membrane	13.42	14.14
TraesCS5A01G267300.1	Wheat	extracellular	7.99	10.12
KRH38085	Soybean	extracellular	0.0	0.0

Protein Annotations

EMBL:ACUP02006607	EnsemblPlants:KRH34530	EnsemblPlantsGene:GLYMA_10G189100	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6
PFAM:PF03547	ProteinID:KRH34530	ProteinID:KRH34530.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0006EE07AF
UniProt:A0A0R0I0D7	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:42227422..42231792

Molecular Weight (calculated)

34454.9 Da

IEP (calculated)

8.652

GRAVY (calculated)

0.527

Length

313 amino acids

Sequence
(BLAST)

001: MNVHSQYFIL KIYHSHSLRD IAYSLDTQKF HFLTILDSMQ TGNLGSLPLI MFQQYVKNAV VLLELWMFVM KKGWHMHLSL AQNFTNKVDD STVGPVSAIE
101: TDLESHSTVP VVASEVLSET NDHVTTLPGG RAKLLQVSKR IRTLVDKLNL KVILSPATIG SILGLIIGVV PPFRKMFVGD NAPLSVVEDS ASMLGEASIP
201: AMTLLLGANL LNGLKRSGMK FSLLMGITVI RYIALPILGV VIVKGAIHFG IIHHDPLYQF VLLLQYVLPP ATSTITQLFG AGQTECSIVM LATYACNSFS
301: LTLWSSLFMW LVL

Best Arabidopsis Sequence Match ( AT1G20925.1 )
(BLAST)

001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA

Arabidopsis Description

PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.