Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99100 | Sorghum | golgi, plasma membrane, vacuole | 90.1 | 90.1 |
| KXG35918 | Sorghum | plasma membrane | 86.96 | 86.96 |
| Zm00001d020953_P001 | Maize | golgi, plasma membrane, vacuole | 86.23 | 85.41 |
| TraesCS5D01G275200.1 | Wheat | plasma membrane | 61.35 | 82.2 |
| HORVU5Hr1G073630.3 | Barley | golgi, plasma membrane, vacuole | 75.85 | 76.4 |
| Os09t0491740-01 | Rice | golgi, plasma membrane, vacuole | 68.36 | 74.67 |
| TraesCS5A01G267300.1 | Wheat | extracellular | 43.0 | 72.06 |
| TraesCS5B01G267800.2 | Wheat | golgi, plasma membrane, vacuole | 61.84 | 67.9 |
| HORVU5Hr1G073670.1 | Barley | cytosol | 75.85 | 58.58 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 58.21 | 57.11 |
| CDY45981 | Canola | golgi, plasma membrane, vacuole | 21.01 | 56.49 |
| VIT_04s0044g01870.t01 | Wine grape | plasma membrane | 50.0 | 54.47 |
| VIT_04s0044g01890.t01 | Wine grape | endoplasmic reticulum, extracellular | 17.15 | 53.38 |
| KRH39386 | Soybean | golgi, plasma membrane, vacuole | 53.14 | 53.14 |
| KRH38085 | Soybean | extracellular | 6.52 | 52.94 |
| PGSC0003DMT400025706 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 51.93 | 52.83 |
| Solyc04g082830.2.1 | Tomato | plasma membrane | 50.0 | 52.27 |
| CDY29492 | Canola | plasma membrane | 48.31 | 52.22 |
| KRH07859 | Soybean | golgi, plasma membrane, vacuole | 51.69 | 51.69 |
| Bra015736.1-P | Field mustard | golgi, plasma membrane, vacuole | 48.55 | 51.67 |
| AT1G76520.2 | Thale cress | plasma membrane | 48.55 | 51.54 |
| CDX87589 | Canola | golgi, plasma membrane, vacuole | 48.31 | 51.41 |
| Bra003716.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 47.58 | 50.77 |
| CDX68094 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 47.58 | 50.77 |
| CDY20402 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 47.34 | 50.65 |
| Solyc12g095750.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 51.21 | 50.6 |
| KRH07852 | Soybean | golgi, plasma membrane, vacuole | 13.77 | 49.57 |
| VIT_04s0044g01860.t01 | Wine grape | golgi, plasma membrane, vacuole | 50.0 | 49.52 |
| KRH76489 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 49.52 | 49.4 |
| Bra008264.1-P | Field mustard | golgi, plasma membrane, vacuole | 47.34 | 49.25 |
| KRH28961 | Soybean | golgi, plasma membrane, vacuole | 49.03 | 48.92 |
| KRH34529 | Soybean | golgi, plasma membrane | 47.1 | 48.75 |
| Solyc02g037550.2.1 | Tomato | plasma membrane | 46.62 | 48.74 |
| PGSC0003DMT400046054 | Potato | plasma membrane | 46.62 | 48.74 |
| CDX85953 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 42.75 | 48.49 |
| VIT_04s0044g01850.t01 | Wine grape | golgi, plasma membrane, vacuole | 47.83 | 47.37 |
| PGSC0003DMT400075596 | Potato | plasma membrane | 23.19 | 46.83 |
| VIT_04s0044g01880.t01 | Wine grape | plastid | 51.69 | 46.62 |
| AT1G76530.1 | Thale cress | plasma membrane | 45.89 | 45.78 |
| KRG92281 | Soybean | plasma membrane | 44.44 | 44.99 |
| Bra025857.1-P | Field mustard | plasma membrane | 43.72 | 44.91 |
| Solyc03g031990.2.1 | Tomato | golgi, plasma membrane, vacuole | 44.93 | 44.82 |
| PGSC0003DMT400048072 | Potato | plasma membrane | 44.69 | 44.58 |
| KRG92282 | Soybean | plasma membrane | 27.78 | 44.4 |
| KRH66552 | Soybean | plasma membrane | 44.93 | 43.87 |
| AT1G20925.1 | Thale cress | plasma membrane | 49.03 | 43.01 |
| KRH48800 | Soybean | plasma membrane | 42.51 | 42.11 |
| CDY31514 | Canola | mitochondrion, plasma membrane | 48.07 | 41.63 |
| KXG36159 | Sorghum | plasma membrane | 40.1 | 40.0 |
| KRH48798 | Soybean | plasma membrane | 38.16 | 37.8 |
| OQU93318 | Sorghum | plasma membrane | 37.2 | 36.75 |
| KXG34923 | Sorghum | plasma membrane | 36.47 | 34.87 |
| KRH07851 | Soybean | plasma membrane | 24.88 | 34.68 |
| KRH34530 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 25.85 | 34.19 |
| KRG89678 | Soybean | plasma membrane | 16.43 | 34.0 |
| EES01656 | Sorghum | plasma membrane | 25.85 | 24.71 |
| EES07131 | Sorghum | golgi, plasma membrane | 25.36 | 23.23 |
Protein Annotations
| EnsemblPlants:EER99101 | EnsemblPlantsGene:SORBI_3002G249300 | EntrezGene:8064861 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31651 | PANTHER:PTHR31651:SF6 |
| PFAM:PF03547 | ProteinID:EER99101 | ProteinID:EER99101.1 | RefSeq:XP_002462580.1 | SEG:seg | TMHMM:TMhelix |
| unigene:Sbi.10104 | UniParc:UPI0001A84292 | UniProt:C5X4G8 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | : |
Description
hypothetical protein
Coordinates
chr2:-:63651195..63658407
Molecular Weight (calculated)
44122.8 Da
IEP (calculated)
6.491
GRAVY (calculated)
0.771
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLIELFATA CVPVFNMLLI TGVGSFLATD FAGILSKEAR KYLNNIVFYV FNPSLVAIYL AKTITMESLA KLWFMPVNIL LAFIFGLFFG WIVVKVTRAP
101: AKLKGLILGC CSAGNLGNIF LIIIPALCKE KGSPFGAPDV CQDIGLAYSS LSLAIGAVFL WSIVYNIVHV TSNVTEGDDS AQTNETKVLN SGNATGAIAE
201: ENCSTSNDCT DECALPLIST SIRPIKDKEP MLGRGWKFLS SISKTVDLKK LFAPSTIAVI VGFIIGGTPL IRNAIIGESA PLRVLQESSE LIGGGAIPSV
301: TLIMGANLLN GVQGGASVPP SVIAGVIVVR YILLPLLGTA LVKGAVWLGL IQPDPLYQFI LHLQYAVPPA MNIGTIMQLF GVGESECSVI FVWVYALASV
401: AVTIWSAFFM WMLS
101: AKLKGLILGC CSAGNLGNIF LIIIPALCKE KGSPFGAPDV CQDIGLAYSS LSLAIGAVFL WSIVYNIVHV TSNVTEGDDS AQTNETKVLN SGNATGAIAE
201: ENCSTSNDCT DECALPLIST SIRPIKDKEP MLGRGWKFLS SISKTVDLKK LFAPSTIAVI VGFIIGGTPL IRNAIIGESA PLRVLQESSE LIGGGAIPSV
301: TLIMGANLLN GVQGGASVPP SVIAGVIVVR YILLPLLGTA LVKGAVWLGL IQPDPLYQFI LHLQYAVPPA MNIGTIMQLF GVGESECSVI FVWVYALASV
401: AVTIWSAFFM WMLS
001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA
Arabidopsis Description
PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.