Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 9
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046054 | Potato | plasma membrane | 95.2 | 95.2 |
| KRH07852 | Soybean | golgi, plasma membrane, vacuole | 16.41 | 56.52 |
| TraesCS5D01G275200.1 | Wheat | plasma membrane | 43.18 | 55.34 |
| VIT_04s0044g01860.t01 | Wine grape | golgi, plasma membrane, vacuole | 58.33 | 55.26 |
| VIT_04s0044g01850.t01 | Wine grape | golgi, plasma membrane, vacuole | 57.58 | 54.55 |
| Solyc04g082830.2.1 | Tomato | plasma membrane | 54.55 | 54.55 |
| Solyc03g031990.2.1 | Tomato | golgi, plasma membrane, vacuole | 54.55 | 52.05 |
| Solyc12g095750.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 52.02 | 49.16 |
| HORVU5Hr1G073630.3 | Barley | golgi, plasma membrane, vacuole | 50.0 | 48.18 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 51.26 | 48.1 |
| EER99100 | Sorghum | golgi, plasma membrane, vacuole | 48.99 | 46.86 |
| EER99101 | Sorghum | golgi, plasma membrane, vacuole | 48.74 | 46.62 |
| KXG35918 | Sorghum | plasma membrane | 47.98 | 45.89 |
| Os09t0491740-01 | Rice | golgi, plasma membrane, vacuole | 43.69 | 45.65 |
| KRH07851 | Soybean | plasma membrane | 33.59 | 44.78 |
| TraesCS5A01G267300.1 | Wheat | extracellular | 27.78 | 44.53 |
| Solyc02g082450.2.1 | Tomato | nucleus | 44.95 | 43.95 |
| TraesCS5B01G267800.2 | Wheat | golgi, plasma membrane, vacuole | 41.67 | 43.77 |
| Solyc03g032080.2.1 | Tomato | golgi, plasma membrane | 25.51 | 41.56 |
| HORVU5Hr1G073670.1 | Barley | cytosol | 50.0 | 36.94 |
| Solyc10g074790.1.1 | Tomato | plasma membrane | 30.81 | 28.77 |
| Solyc02g091240.1.1 | Tomato | golgi, plasma membrane | 28.54 | 25.0 |
| Zm00001d024842_P002 | Maize | plasma membrane | 18.43 | 23.62 |
Protein Annotations
| EnsemblPlants:Solyc02g037550.2.1 | EnsemblPlantsGene:Solyc02g037550.2 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31651 | PANTHER:PTHR31651:SF6 | PFAM:PF03547 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002767900 | UniProt:K4B5U9 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 |
Description
No Description!
Coordinates
chr2:-:31094995..31098669
Molecular Weight (calculated)
43175.0 Da
IEP (calculated)
8.367
GRAVY (calculated)
0.717
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFVELFVVA LMPVLKTLII TAVGLLLALE PVNLLGSTAR HHLNNLVFYI FTPALVASSL AETVTSSNIV SLWFMPVNIL LTFIIGSILG WILVKITKTP
101: IHLHGLVISC CSAGNLGNLL LIIIPAVCEE KNSPFGDSIT CSTNGKAYAS LSMAVGAVYI WTYIYNMIRA SGSQHNNAST HVPKLPPEEM DHQSQLALPL
201: ISYQTIHEHH QGHVVKKMKQ HIKIWTQRIN FKMLFAPSTI ATIVGILIGV SSLLRNLMIG NEAPLHVIDS SASMLGEAAI PAMTLIVGAN LLKGLKKSEV
301: GVWIVIGIQV IRYIALPLSG ICVVKVARHF GLVGSDSLYQ FVLLLQYALP SAMTIGTITQ LFEVGESECS VIMLWNYALA SVALTLWTTY YMWILS
101: IHLHGLVISC CSAGNLGNLL LIIIPAVCEE KNSPFGDSIT CSTNGKAYAS LSMAVGAVYI WTYIYNMIRA SGSQHNNAST HVPKLPPEEM DHQSQLALPL
201: ISYQTIHEHH QGHVVKKMKQ HIKIWTQRIN FKMLFAPSTI ATIVGILIGV SSLLRNLMIG NEAPLHVIDS SASMLGEAAI PAMTLIVGAN LLKGLKKSEV
301: GVWIVIGIQV IRYIALPLSG ICVVKVARHF GLVGSDSLYQ FVLLLQYALP SAMTIGTITQ LFEVGESECS VIMLWNYALA SVALTLWTTY YMWILS
001: MVKLLELFIT SSKPVVEILL ITSVGFYMAL DGVNLLGHDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA
Arabidopsis Description
PILS3Protein PIN-LIKES 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.