Factsheet for PGSC0003DMT400046054

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g037550.2.1	Tomato	plasma membrane	95.2	95.2
KRH07852	Soybean	golgi, plasma membrane, vacuole	16.16	55.65
VIT_04s0044g01860.t01	Wine grape	golgi, plasma membrane, vacuole	58.59	55.5
TraesCS5D01G275200.1	Wheat	plasma membrane	42.93	55.02
VIT_04s0044g01850.t01	Wine grape	golgi, plasma membrane, vacuole	57.58	54.55
PGSC0003DMT400025706	Potato	endoplasmic reticulum, plasma membrane, vacuole	55.3	53.81
PGSC0003DMT400048072	Potato	plasma membrane	53.54	51.08
GSMUA_Achr3P03690_001	Banana	plasma membrane	51.77	48.58
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	49.75	47.93
EER99100	Sorghum	golgi, plasma membrane, vacuole	49.24	47.1
EER99101	Sorghum	golgi, plasma membrane, vacuole	48.74	46.62
KXG35918	Sorghum	plasma membrane	47.98	45.89
KRH07851	Soybean	plasma membrane	34.09	45.45
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	43.18	45.12
PGSC0003DMT400048041	Potato	plasma membrane	44.7	44.81
TraesCS5A01G267300.1	Wheat	extracellular	27.27	43.72
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	41.16	43.24
PGSC0003DMT400035511	Potato	plasma membrane	44.19	43.21
PGSC0003DMT400075596	Potato	plasma membrane	21.72	41.95
HORVU5Hr1G073670.1	Barley	cytosol	49.75	36.75
PGSC0003DMT400071229	Potato	cytosol, golgi, plasma membrane	29.55	27.59
PGSC0003DMT400078752	Potato	plasma membrane	28.54	25.0
Zm00001d024842_P002	Maize	plasma membrane	18.94	24.27

Protein Annotations

EnsemblPlants:PGSC0003DMT400046054	EnsemblPlantsGene:PGSC0003DMG400017870	EntrezGene:102596004	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6
PFAM:PF03547	PGSC:PGSC0003DMG400017870	RefSeq:XP_006350447.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002949348
UniProt:M1BIL3	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:	:

Description

Auxin:hydrogen symporter [Source:PGSC_GENE;Acc:PGSC0003DMG400017870]

Coordinates

chr2:-:18262444..18266006

Molecular Weight (calculated)

43204.0 Da

IEP (calculated)

8.920

GRAVY (calculated)

0.694

Length

396 amino acids

Sequence
(BLAST)

001: MAFVELFVVA LVPVLKTLII TAVGLFLALE RINLLGSTAR HHLNNLVFYI FTPALVASSL AETVTSSNIV SLWFMPVNIL LTFIIGSVLG WILVKITKTP
101: IHLHGLVISC CSAGNLGNLL LIIIPAVCEE KNSPFGDSIT CSTNGKAYAS LSMAVGAVYI WTYIYNMIRA SGSQHNNTST QVPKLPPMDM DHESQLALPL
201: IAYQTTHDHH QGHVVKKMKQ HIKTWTQRIK FKMLFAPSTI ATIVGILIGV SSLLRKLIIG NEAPLHVIDS SASMLGEAAI PAMTLIVGAN LLKGLKKSEV
301: GVWIVIGIQV IRYVALPLSG ICVVKVARHY GLVGSDSLYQ FVLLLQYALP SAMTIGTITQ LFEVGESECS VIMLWNYALA SVALTLWTTY YMWILS

Best Arabidopsis Sequence Match ( AT1G76520.1 )
(BLAST)

001: MVKLLELFIT SSKPVVEILL ITSVGFYMAL DGVNLLGHDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA

Arabidopsis Description

PILS3Protein PIN-LIKES 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.