Factsheet for Zm00001d024842_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007109_P001	Maize	cytosol, golgi, plastid	53.4	53.4
Zm00001d007499_P001	Maize	plasma membrane	22.98	44.1
Zm00001d025364_P002	Maize	plasma membrane	40.45	37.54
Zm00001d021413_P002	Maize	plasma membrane	47.9	32.89
Zm00001d040149_P001	Maize	plasma membrane	26.54	32.16
VIT_04s0044g01890.t01	Wine grape	endoplasmic reticulum, extracellular	11.0	25.56
PGSC0003DMT400046054	Potato	plasma membrane	24.27	18.94
Solyc02g037550.2.1	Tomato	plasma membrane	23.62	18.43
CDY20402	Canola	endoplasmic reticulum, plasma membrane, vacuole	22.98	18.35
CDY29492	Canola	plasma membrane	22.65	18.28
CDY45981	Canola	golgi, plasma membrane, vacuole	9.06	18.18
CDX87589	Canola	golgi, plasma membrane, vacuole	22.65	17.99
AT1G76520.2	Thale cress	plasma membrane	22.65	17.95
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	22.98	17.84
Bra015736.1-P	Field mustard	golgi, plasma membrane, vacuole	22.33	17.74
Solyc03g031990.2.1	Tomato	golgi, plasma membrane, vacuole	23.3	17.35
CDX68094	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.68	17.27
Bra003716.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	21.68	17.27
Bra025857.1-P	Field mustard	plasma membrane	22.33	17.12
PGSC0003DMT400048072	Potato	plasma membrane	22.98	17.11
Zm00001d020953_P001	Maize	golgi, plasma membrane, vacuole	20.71	15.31
CDY31514	Canola	mitochondrion, plasma membrane	22.65	14.64
AT1G20925.1	Thale cress	plasma membrane	22.33	14.62
CDX85953	Canola	endoplasmic reticulum, plasma membrane, vacuole	17.15	14.52
AT1G76530.1	Thale cress	plasma membrane	18.77	13.98
Zm00001d051044_P001	Maize	golgi, plasma membrane, vacuole	20.06	13.75
Zm00001d043083_P003	Maize	plasma membrane	17.8	12.7
KRH38085	Soybean	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d024842_P002	EnsemblPlants:Zm00001d024842_T002	EnsemblPlantsGene:Zm00001d024842	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR31651	PANTHER:PTHR31651:SF3	ProteinID:AQK42169.1	SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI00084301FF	UniProt:A0A1D6J2A3	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:

Description

Protein PIN-LIKES 7

Coordinates

chr10:+:90452122..90455648

Molecular Weight (calculated)

35060.6 Da

IEP (calculated)

8.029

GRAVY (calculated)

-0.247

Length

309 amino acids

Sequence
(BLAST)

001: MAFCLAGNLL LIIVPAVCDK DRNPFGDDSS TCRSRSLSYL SLSMALGGLF IWTHTYSLMQ KSGKLYNKMQ SKRIQCLADS NEEHEQAKED GSAGCADKEA
101: PLPTSIKPRE HEHGEEKEHQ MEAPLLSCES EVTDKGFWTK LKDAIHQFIE EMMAPPTIST RQHDPLHHPY PRRKPDSRWA LFRLESDIAV IQARLRKSGL
201: KHAVIVAILC VRFVLLLLIG IAVVRTAYGL GFRASHDEHR KSSIEAIEAG KKKLYEATYI KNLTTRMGPF MDRVVVEAMV ILYWLLVADK EFEIKINDNI
301: YEVRIRCSG

Best Arabidopsis Sequence Match ( AT2G17500.1 )
(BLAST)

001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV

Arabidopsis Description

PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.