Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015736.1-P | Field mustard | golgi, plasma membrane, vacuole | 98.97 | 98.97 |
| CDY45981 | Canola | golgi, plasma membrane, vacuole | 37.02 | 93.51 |
| CDY20402 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 90.75 | 91.21 |
| CDX85953 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 83.55 | 89.04 |
| AT1G76520.2 | Thale cress | plasma membrane | 88.69 | 88.46 |
| CDX68094 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 88.17 | 88.4 |
| AT1G76530.1 | Thale cress | plasma membrane | 81.23 | 76.14 |
| CDY29492 | Canola | plasma membrane | 72.49 | 73.63 |
| KRH38085 | Soybean | extracellular | 7.71 | 58.82 |
| CDY31514 | Canola | mitochondrion, plasma membrane | 71.98 | 58.58 |
| TraesCS5D01G275200.1 | Wheat | plasma membrane | 44.47 | 55.99 |
| PGSC0003DMT400025706 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 57.07 | 54.55 |
| Solyc04g082830.2.1 | Tomato | plasma membrane | 55.01 | 54.04 |
| KRH07852 | Soybean | golgi, plasma membrane, vacuole | 15.94 | 53.91 |
| KRH76489 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 55.78 | 52.29 |
| KRH28961 | Soybean | golgi, plasma membrane, vacuole | 54.76 | 51.33 |
| VIT_04s0044g01870.t01 | Wine grape | plasma membrane | 49.61 | 50.79 |
| VIT_04s0044g01890.t01 | Wine grape | endoplasmic reticulum, extracellular | 17.22 | 50.38 |
| Solyc12g095750.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 53.47 | 49.64 |
| KRH39386 | Soybean | golgi, plasma membrane, vacuole | 52.7 | 49.52 |
| KRH07859 | Soybean | golgi, plasma membrane, vacuole | 52.44 | 49.28 |
| KRH34529 | Soybean | golgi, plasma membrane | 50.64 | 49.25 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 53.21 | 49.05 |
| EER99100 | Sorghum | golgi, plasma membrane, vacuole | 51.67 | 48.55 |
| EER99101 | Sorghum | golgi, plasma membrane, vacuole | 51.41 | 48.31 |
| HORVU5Hr1G073630.3 | Barley | golgi, plasma membrane, vacuole | 50.9 | 48.18 |
| VIT_04s0044g01860.t01 | Wine grape | golgi, plasma membrane, vacuole | 50.9 | 47.37 |
| KXG35918 | Sorghum | plasma membrane | 49.87 | 46.86 |
| Os09t0491740-01 | Rice | golgi, plasma membrane, vacuole | 45.24 | 46.44 |
| KRG92281 | Soybean | plasma membrane | 48.33 | 45.97 |
| VIT_04s0044g01850.t01 | Wine grape | golgi, plasma membrane, vacuole | 49.1 | 45.69 |
| TraesCS5A01G267300.1 | Wheat | extracellular | 28.79 | 45.34 |
| VIT_04s0044g01880.t01 | Wine grape | plastid | 53.47 | 45.32 |
| TraesCS5B01G267800.2 | Wheat | golgi, plasma membrane, vacuole | 43.7 | 45.09 |
| KRH66552 | Soybean | plasma membrane | 49.1 | 45.05 |
| PGSC0003DMT400075596 | Potato | plasma membrane | 22.62 | 42.93 |
| KRG92282 | Soybean | plasma membrane | 28.53 | 42.86 |
| CDY57767 | Canola | plasma membrane | 42.93 | 42.28 |
| CDY55102 | Canola | plasma membrane | 42.93 | 42.28 |
| CDY30361 | Canola | golgi, plasma membrane | 42.42 | 41.98 |
| CDY26812 | Canola | plasma membrane | 42.42 | 41.98 |
| CDX81425 | Canola | plasma membrane | 42.16 | 41.73 |
| CDY24342 | Canola | plasma membrane | 42.16 | 41.73 |
| CDY18579 | Canola | plasma membrane | 42.16 | 41.62 |
| KRH48800 | Soybean | plasma membrane | 44.47 | 41.39 |
| CDY20805 | Canola | extracellular, plasma membrane | 31.62 | 40.07 |
| KRH48798 | Soybean | plasma membrane | 42.93 | 39.95 |
| KRH34530 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 30.59 | 38.02 |
| KRH07851 | Soybean | plasma membrane | 28.53 | 37.37 |
| HORVU5Hr1G073670.1 | Barley | cytosol | 50.9 | 36.94 |
| CDY57768 | Canola | extracellular, plasma membrane, vacuole | 12.6 | 36.57 |
| KRG89678 | Soybean | plasma membrane | 18.77 | 36.5 |
| CDY01222 | Canola | golgi, plasma membrane, plastid | 30.33 | 28.03 |
| CDY70057 | Canola | golgi, plasma membrane, plastid | 30.33 | 27.9 |
| CDY03621 | Canola | cytosol, golgi, plasma membrane | 30.59 | 27.61 |
| CDY58937 | Canola | cytosol, golgi, plasma membrane | 30.33 | 27.38 |
| CDX72776 | Canola | plasma membrane | 31.36 | 26.81 |
| CDX96302 | Canola | golgi, plasma membrane | 31.11 | 26.36 |
| Zm00001d024842_P002 | Maize | plasma membrane | 17.99 | 22.65 |
Protein Annotations
| EnsemblPlants:CDX87589 | EnsemblPlantsGene:GSBRNA2T00146594001 | GO:A0A078DGS0 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31651 | PANTHER:PTHR31651:SF6 |
| PFAM:PF03547 | ProteinID:CDX87589 | ProteinID:CDX87589.1 | TMHMM:TMhelix | UniParc:UPI0004EE5508 | MapMan:11.2.4.2 |
| MapMan:24.2.5.2.2 | : | : | : | : | : |
Description
BnaA07g32840D
Coordinates
chrLK031850:-:1364715..1366600
Molecular Weight (calculated)
42476.4 Da
IEP (calculated)
9.215
GRAVY (calculated)
0.601
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKLLNLFIT SSKPVVEILL ITIVGFYLAL DGVNLLGQDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLIVG CCAAGNLGNM PLIIVPAICK ERGGPFGDPE NCQKYGMGYV ALSMAMGSVY IWTYVYNLMR VLNSPIETQP SIESNYDTCK VPLIPSKEEE
201: DNQKAGRWDR IKRRIVSLSE KVNLRTIFAP STIAAMIALV IGLITPLRKL IIGNGAPLGV LQDSVTLVGD GAIPAMTLII GGNLLKGMRS SGMKKSTIVG
301: VLVARYILLP ISGVLIVRGA YKLDMIPSEP LYQFVLLIQY AVPPAMNLGT ITQLFGAGES ECSVIMLWTY ALASVSLTAW PTFFMWLVA
101: PSHLRGLIVG CCAAGNLGNM PLIIVPAICK ERGGPFGDPE NCQKYGMGYV ALSMAMGSVY IWTYVYNLMR VLNSPIETQP SIESNYDTCK VPLIPSKEEE
201: DNQKAGRWDR IKRRIVSLSE KVNLRTIFAP STIAAMIALV IGLITPLRKL IIGNGAPLGV LQDSVTLVGD GAIPAMTLII GGNLLKGMRS SGMKKSTIVG
301: VLVARYILLP ISGVLIVRGA YKLDMIPSEP LYQFVLLIQY AVPPAMNLGT ITQLFGAGES ECSVIMLWTY ALASVSLTAW PTFFMWLVA
001: MVKLLELFIT SSKPVVEILL ITSVGFYMAL DGVNLLGHDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA
Arabidopsis Description
PILS3Protein PIN-LIKES 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.