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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031803.1-P Field mustard plasma membrane 97.22 100.0
CDY57767 Canola plasma membrane 99.75 99.75
CDX81425 Canola plasma membrane 96.46 96.95
AT5G65980.1 Thale cress plasma membrane 96.2 96.2
CDY18579 Canola plasma membrane 95.95 96.19
CDY57768 Canola extracellular, plasma membrane, vacuole 31.14 91.79
CDY26812 Canola plasma membrane 66.08 66.41
CDY30361 Canola golgi, plasma membrane 66.08 66.41
CDY24342 Canola plasma membrane 65.82 66.16
CDY20805 Canola extracellular, plasma membrane 49.11 63.19
PGSC0003DMT400048041 Potato plasma membrane 62.78 62.78
PGSC0003DMT400035511 Potato plasma membrane 63.04 61.48
Solyc02g082450.2.1 Tomato nucleus 62.03 60.49
VIT_07s0031g02200.t01 Wine grape plasma membrane 63.29 59.38
Solyc03g032080.2.1 Tomato golgi, plasma membrane 35.95 58.44
TraesCS5D01G361500.1 Wheat plasma membrane 58.99 57.53
TraesCS5B01G356700.1 Wheat plasma membrane 59.75 56.59
TraesCS5A01G354300.1 Wheat plasma membrane 59.49 56.49
KRH76521 Soybean plasma membrane 59.24 55.85
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 56.96 55.69
HORVU5Hr1G087880.13 Barley plasma membrane 60.0 55.5
GSMUA_Achr10P... Banana golgi, plasma membrane 57.72 55.34
KRH28941 Soybean plasma membrane 58.48 55.13
KXG36159 Sorghum plasma membrane 56.96 54.22
GSMUA_Achr9P21210_001 Banana plasma membrane 57.72 54.16
Os09t0555100-00 Rice plasma membrane 57.72 53.9
GSMUA_Achr10P... Banana golgi, plasma membrane 56.46 53.86
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 55.44 53.55
Os09t0554300-01 Rice plasma membrane 57.97 53.5
TraesCS6A01G421200.1 Wheat plasma membrane 54.43 52.06
CDY45981 Canola golgi, plasma membrane, vacuole 20.0 51.3
TraesCS6D01G404400.1 Wheat plasma membrane 54.18 49.88
GSMUA_Achr4P25890_001 Banana plasma membrane 53.67 49.88
TraesCS6B01G466900.1 Wheat plasma membrane 54.94 49.32
GSMUA_Achr5P15890_001 Banana golgi, plasma membrane 52.66 49.06
HORVU6Hr1G094970.4 Barley golgi 52.66 48.04
KXG34923 Sorghum plasma membrane 52.66 48.04
TraesCS4B01G322800.1 Wheat plasma membrane 49.62 47.57
TraesCS4D01G319200.1 Wheat plasma membrane 49.37 47.22
OQU93318 Sorghum plasma membrane 49.87 47.02
KRH56032 Soybean extracellular, golgi, plasma membrane 14.43 46.72
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 59.75 45.47
Zm00001d040149_P001 Maize plasma membrane 28.1 43.53
CDY29492 Canola plasma membrane 42.03 43.34
CDX87589 Canola golgi, plasma membrane, vacuole 42.28 42.93
CDY20402 Canola endoplasmic reticulum, plasma membrane, vacuole 41.52 42.38
Zm00001d007499_P001 Maize plasma membrane 17.22 42.24
CDX68094 Canola endoplasmic reticulum, plasma membrane, vacuole 40.25 40.98
Zm00001d021413_P002 Maize plasma membrane 45.82 40.22
CDX85953 Canola endoplasmic reticulum, plasma membrane, vacuole 36.2 39.18
HORVU4Hr1G082680.2 Barley cytosol, endoplasmic reticulum, plasma membrane 22.28 37.77
TraesCS5A01G494900.1 Wheat golgi, peroxisome, plasma membrane, plastid 47.59 36.5
Zm00001d007109_P001 Maize cytosol, golgi, plastid 27.09 34.63
CDY31514 Canola mitochondrion, plasma membrane 41.77 34.52
Zm00001d025364_P002 Maize plasma membrane 28.35 33.63
CDY01222 Canola golgi, plasma membrane, plastid 29.62 27.79
CDY70057 Canola golgi, plasma membrane, plastid 29.62 27.66
CDY03621 Canola cytosol, golgi, plasma membrane 29.62 27.15
CDY58937 Canola cytosol, golgi, plasma membrane 29.62 27.15
CDX72776 Canola plasma membrane 29.37 25.49
CDX96302 Canola golgi, plasma membrane 29.62 25.49
Protein Annotations
EnsemblPlants:CDY55102EnsemblPlantsGene:GSBRNA2T00016405001GO:A0A078IUL0GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547ProteinID:CDY55102ProteinID:CDY55102.1TMHMM:TMhelixUniParc:UPI0004EDD29DUniProt:A0A078IUL0
MapMan:11.2.4.2MapMan:24.2.5.2.2::::
Description
BnaA02g34870DBnaA02g34870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUL0]
Coordinates
chrLK033375:-:46010..48198
Molecular Weight (calculated)
43153.7 Da
IEP (calculated)
5.833
GRAVY (calculated)
0.689
Length
395 amino acids
Sequence
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AQTVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLAKSPNKE IDSDPRTLLL
201: KPQQNQDLEI QVKEKVSTGT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGDGTIP CITLILGGNL IQGLRSSAVK
301: TSVIVGVICV RYIILPVVGV GVVQLAWNLG YLPPDPLFRY VLMLQFTLPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Arabidopsis Description
PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.