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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 9
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55102 Canola plasma membrane 100.0 97.22
CDY57767 Canola plasma membrane 99.74 96.96
AT5G65980.1 Thale cress plasma membrane 96.09 93.42
Bra037268.1-P Field mustard golgi, plasma membrane 65.62 64.12
Bra002068.1-P Field mustard plasma membrane 65.1 63.61
PGSC0003DMT400048041 Potato plasma membrane 62.5 60.76
Bra037193.1-P Field mustard plasma membrane 94.79 59.67
PGSC0003DMT400035511 Potato plasma membrane 62.5 59.26
Solyc03g032080.2.1 Tomato golgi, plasma membrane 36.98 58.44
Solyc02g082450.2.1 Tomato nucleus 61.46 58.27
VIT_07s0031g02200.t01 Wine grape plasma membrane 63.02 57.48
TraesCS5D01G361500.1 Wheat plasma membrane 58.33 55.31
TraesCS5B01G356700.1 Wheat plasma membrane 59.11 54.44
TraesCS5A01G354300.1 Wheat plasma membrane 58.85 54.33
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 56.77 53.96
GSMUA_Achr10P... Banana golgi, plasma membrane 57.29 53.4
HORVU5Hr1G087880.13 Barley plasma membrane 59.38 53.4
KRH76521 Soybean plasma membrane 58.07 53.22
KXG36159 Sorghum plasma membrane 56.77 52.53
KRH28941 Soybean plasma membrane 57.29 52.51
GSMUA_Achr9P21210_001 Banana plasma membrane 57.55 52.49
GSMUA_Achr10P... Banana golgi, plasma membrane 56.25 52.17
Os09t0555100-00 Rice plasma membrane 57.03 51.77
Os09t0554300-01 Rice plasma membrane 57.29 51.4
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 54.43 51.1
TraesCS6A01G421200.1 Wheat plasma membrane 53.91 50.12
GSMUA_Achr4P25890_001 Banana plasma membrane 53.39 48.24
TraesCS6D01G404400.1 Wheat plasma membrane 53.65 48.02
TraesCS6B01G466900.1 Wheat plasma membrane 54.43 47.5
GSMUA_Achr5P15890_001 Banana golgi, plasma membrane 52.34 47.41
KRH56032 Soybean extracellular, golgi, plasma membrane 14.84 46.72
KXG34923 Sorghum plasma membrane 52.6 46.65
HORVU6Hr1G094970.4 Barley golgi 52.34 46.42
TraesCS4B01G322800.1 Wheat plasma membrane 49.48 46.12
TraesCS4D01G319200.1 Wheat plasma membrane 49.22 45.76
OQU93318 Sorghum plasma membrane 49.74 45.58
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 59.11 43.74
Zm00001d040149_P001 Maize plasma membrane 28.91 43.53
Zm00001d007499_P001 Maize plasma membrane 17.71 42.24
Bra015736.1-P Field mustard golgi, plasma membrane, vacuole 41.93 41.39
Bra003716.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 40.62 40.21
Bra008264.1-P Field mustard golgi, plasma membrane, vacuole 41.67 40.2
Zm00001d021413_P002 Maize plasma membrane 46.61 39.78
HORVU4Hr1G082680.2 Barley cytosol, endoplasmic reticulum, plasma membrane 22.92 37.77
Bra025857.1-P Field mustard plasma membrane 38.8 36.97
TraesCS5A01G494900.1 Wheat golgi, peroxisome, plasma membrane, plastid 47.4 35.34
Zm00001d007109_P001 Maize cytosol, golgi, plastid 27.6 34.3
Zm00001d025364_P002 Maize plasma membrane 29.17 33.63
Bra030441.1-P Field mustard golgi, plasma membrane, plastid 30.21 27.42
Bra014265.1-P Field mustard plasma membrane 30.21 26.91
Bra016159.1-P Field mustard golgi, plasma membrane 30.47 25.49
Protein Annotations
EnsemblPlants:Bra031803.1EnsemblPlants:Bra031803.1-PEnsemblPlantsGene:Bra031803GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547TMHMM:TMhelixUniParc:UPI0002546CBAUniProt:M4ESM3MapMan:11.2.4.2MapMan:24.2.5.2.2
Description
AT5G65980 (E=3e-210) | auxin efflux carrier family protein
Coordinates
chrA02:-:27825205..27826959
Molecular Weight (calculated)
41963.2 Da
IEP (calculated)
7.145
GRAVY (calculated)
0.673
Length
384 amino acids
Sequence
(BLAST)
001: MPIVQVLLIS VLGAFLATDY CSLLSADTRR SVNKLVFVVF TPCIMFANLA QTVTLQDIIS WWFMPINVGI TFLVGGILGW LVVKLLNPKP QLHGLIIATC
101: ASGNMGNLML ILVPAICDEE GSPFGNRSVC RSIGLSYASF SMALGGFYIW TYSYQLVRSS ATQFRALEAA GLAKSPNKEI DSDPRTLLLK PQQNQDLEIQ
201: VKEKVSTGTY IKDLLHQILE ELFAPPTIGA ILGFVFGATN WLRNLIIGEN APLRVIQDSV KLLGDGTIPC ITLILGGNLI QGLRSSAVKT SVIVGVICVR
301: YIILPVVGVG VVQLAWNLGY LPPDPLFRYV LMLQFTLPPA MNISTMAQLF DVAQDECSVI FLWTYLVASL ALTVWSTIFL SILS
Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Arabidopsis Description
PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.