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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G356700.1 Wheat plasma membrane 81.93 81.53
TraesCS5A01G354300.1 Wheat plasma membrane 81.69 81.49
Os09t0554300-01 Rice plasma membrane 83.86 81.31
HORVU5Hr1G087880.13 Barley plasma membrane 82.41 80.09
TraesCS5D01G361500.1 Wheat plasma membrane 76.14 78.02
Zm00001d007499_P001 Maize plasma membrane 29.64 76.4
Os09t0555100-00 Rice plasma membrane 77.83 76.36
Zm00001d021413_P002 Maize plasma membrane 80.0 73.78
Zm00001d040149_P001 Maize plasma membrane 40.72 66.27
Zm00001d025364_P002 Maize plasma membrane 52.77 65.77
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 81.93 65.51
GSMUA_Achr10P... Banana golgi, plasma membrane 64.58 65.05
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 62.65 64.36
GSMUA_Achr9P21210_001 Banana plasma membrane 64.58 63.66
GSMUA_Achr10P... Banana golgi, plasma membrane 60.72 60.87
AT5G65980.1 Thale cress plasma membrane 54.46 57.22
CDY55102 Canola plasma membrane 54.22 56.96
CDY57767 Canola plasma membrane 54.22 56.96
Bra031803.1-P Field mustard plasma membrane 52.53 56.77
CDX81425 Canola plasma membrane 53.49 56.49
CDY18579 Canola plasma membrane 53.49 56.35
VIT_07s0031g02200.t01 Wine grape plasma membrane 56.63 55.82
PGSC0003DMT400048041 Potato plasma membrane 53.01 55.7
Bra002068.1-P Field mustard plasma membrane 52.53 55.47
CDY24342 Canola plasma membrane 52.53 55.47
Solyc02g082450.2.1 Tomato nucleus 53.98 55.31
PGSC0003DMT400035511 Potato plasma membrane 53.98 55.31
CDY30361 Canola golgi, plasma membrane 51.81 54.71
Bra037268.1-P Field mustard golgi, plasma membrane 51.81 54.71
CDY26812 Canola plasma membrane 51.57 54.45
Zm00001d007109_P001 Maize cytosol, golgi, plastid 40.48 54.37
AT2G17500.2 Thale cress plasma membrane 51.57 54.04
KXG34923 Sorghum plasma membrane 54.7 52.42
CDY20805 Canola extracellular, plasma membrane 38.31 51.79
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 50.84 51.59
CDY57768 Canola extracellular, plasma membrane, vacuole 16.63 51.49
Solyc03g032080.2.1 Tomato golgi, plasma membrane 29.64 50.62
KRH76521 Soybean plasma membrane 50.84 50.36
KRH28941 Soybean plasma membrane 50.84 50.36
OQU93318 Sorghum plasma membrane 50.6 50.12
KRH56032 Soybean extracellular, golgi, plasma membrane 14.22 48.36
KXG35918 Sorghum plasma membrane 40.72 40.82
EER99100 Sorghum golgi, plasma membrane, vacuole 40.48 40.58
EER99101 Sorghum golgi, plasma membrane, vacuole 40.0 40.1
Bra037193.1-P Field mustard plasma membrane 52.29 35.57
EES07131 Sorghum golgi, plasma membrane 29.64 27.21
EES01656 Sorghum plasma membrane 26.99 25.87
Protein Annotations
EnsemblPlants:KXG36159EnsemblPlantsGene:SORBI_3002G292100GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3PFAM:PF03547
ProteinID:KXG36159ProteinID:KXG36159.1ProteinID:KXG36160.1ProteinID:OQU89907.1ProteinID:OQU89908.1SEG:seg
TMHMM:TMhelixUniParc:UPI0003C70A0CUniProt:A0A1B6QE27MapMan:11.2.4.2MapMan:24.2.5.2.2:
Description
hypothetical protein
Coordinates
chr2:+:67011078..67015058
Molecular Weight (calculated)
45135.7 Da
IEP (calculated)
6.410
GRAVY (calculated)
0.521
Length
415 amino acids
Sequence
(BLAST)
001: MGFFSLFLVA SMPVVQVLLI GAIGAFLASG FSNVLTTSAR RDMNKVVFTV FTPCLMFASL AKTVTLADVI SWWFMPVNIG ITFIIGGTLG WIACNILKPP
101: QHFRGLIMAF CSAGNLGNLL LIIVPAVCDE DGSPFGKDPS ICRSRGLSYS SLSMALGGIY IWTHTYSLMQ KSGKLYHKMH SKSIQCPADS DEEHSSDYPD
201: EEAPLPTSVK PGDHEHGEEN QMEAPLLSCE SEVADKGFWT NLKDAVHQFI EELMAPPTIS AIIGFVVGLV PWLKSLIIGD GAPFKVIQDS LQLMGNGAIP
301: CITLILGGNL TQGLRKSGLK RRVIVTILCI RFVLLPLIGI AVVHAAYGLG FLSRDPLYRY VLMVQFAVPP AMNIGTMAQL FDVGQEECSV IFLWTYLVAA
401: VALTTWSTIF MSILS
Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Arabidopsis Description
PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.