Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- golgi 2
- plasma membrane 3
- mitochondrion 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048041 | Potato | plasma membrane | 95.88 | 58.99 |
| CDY20805 | Canola | extracellular, plasma membrane | 59.26 | 46.91 |
| KRH56032 | Soybean | extracellular, golgi, plasma membrane | 23.05 | 45.9 |
| Solyc02g082450.2.1 | Tomato | nucleus | 70.78 | 42.47 |
| Zm00001d040149_P001 | Maize | plasma membrane | 43.21 | 41.18 |
| Zm00001d007499_P001 | Maize | plasma membrane | 26.75 | 40.37 |
| Bra031803.1-P | Field mustard | plasma membrane | 58.44 | 36.98 |
| Bra002068.1-P | Field mustard | plasma membrane | 59.26 | 36.64 |
| CDY24342 | Canola | plasma membrane | 58.85 | 36.39 |
| CDY26812 | Canola | plasma membrane | 58.85 | 36.39 |
| CDY18579 | Canola | plasma membrane | 58.85 | 36.29 |
| CDY30361 | Canola | golgi, plasma membrane | 58.44 | 36.13 |
| CDX81425 | Canola | plasma membrane | 58.44 | 36.13 |
| Bra037268.1-P | Field mustard | golgi, plasma membrane | 58.44 | 36.13 |
| AT2G17500.2 | Thale cress | plasma membrane | 58.85 | 36.11 |
| CDY55102 | Canola | plasma membrane | 58.44 | 35.95 |
| CDY57767 | Canola | plasma membrane | 58.44 | 35.95 |
| AT5G65980.1 | Thale cress | plasma membrane | 57.2 | 35.19 |
| VIT_07s0031g02200.t01 | Wine grape | plasma membrane | 60.91 | 35.15 |
| HORVU4Hr1G082680.2 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 32.51 | 33.91 |
| GSMUA_Achr9P21210_001 | Banana | plasma membrane | 55.56 | 32.07 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 54.32 | 32.04 |
| KRH76521 | Soybean | plasma membrane | 53.5 | 31.03 |
| GSMUA_Achr2P03670_001 | Banana | golgi, plasma membrane, vacuole | 51.44 | 30.94 |
| TraesCS5D01G361500.1 | Wheat | plasma membrane | 51.44 | 30.86 |
| KRH39407 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 51.85 | 30.81 |
| KRH28941 | Soybean | plasma membrane | 53.09 | 30.79 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 52.26 | 30.68 |
| TraesCS5A01G354300.1 | Wheat | plasma membrane | 52.26 | 30.53 |
| Os09t0555100-00 | Rice | plasma membrane | 53.09 | 30.5 |
| TraesCS5B01G356700.1 | Wheat | plasma membrane | 52.26 | 30.46 |
| HORVU5Hr1G087880.13 | Barley | plasma membrane | 52.67 | 29.98 |
| Os09t0554300-01 | Rice | plasma membrane | 52.67 | 29.91 |
| KXG36159 | Sorghum | plasma membrane | 50.62 | 29.64 |
| GSMUA_Achr5P15890_001 | Banana | golgi, plasma membrane | 51.44 | 29.48 |
| GSMUA_Achr4P25890_001 | Banana | plasma membrane | 50.62 | 28.94 |
| TraesCS6A01G421200.1 | Wheat | plasma membrane | 48.15 | 28.33 |
| TraesCS6B01G466900.1 | Wheat | plasma membrane | 51.03 | 28.18 |
| KXG34923 | Sorghum | plasma membrane | 50.21 | 28.18 |
| Zm00001d025364_P002 | Maize | plasma membrane | 38.27 | 27.93 |
| TraesCS6D01G404400.1 | Wheat | plasma membrane | 48.15 | 27.27 |
| HORVU6Hr1G094970.4 | Barley | golgi | 48.56 | 27.25 |
| Solyc02g037550.2.1 | Tomato | plasma membrane | 41.56 | 25.51 |
| TraesCS4B01G322800.1 | Wheat | plasma membrane | 42.39 | 25.0 |
| OQU93318 | Sorghum | plasma membrane | 42.39 | 24.58 |
| TraesCS4D01G319200.1 | Wheat | plasma membrane | 41.56 | 24.46 |
| TraesCS5D01G361600.2 | Wheat | mitochondrion, plasma membrane | 51.85 | 24.28 |
| Solyc12g095750.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 41.56 | 24.11 |
| Solyc04g082830.2.1 | Tomato | plasma membrane | 39.09 | 23.99 |
| Bra037193.1-P | Field mustard | plasma membrane | 57.61 | 22.95 |
| Zm00001d007109_P001 | Maize | cytosol, golgi, plastid | 27.98 | 22.01 |
| Zm00001d021413_P002 | Maize | plasma membrane | 39.09 | 21.11 |
| Solyc03g031990.2.1 | Tomato | golgi, plasma membrane, vacuole | 34.16 | 20.0 |
| TraesCS5A01G494900.1 | Wheat | golgi, peroxisome, plasma membrane, plastid | 39.92 | 18.84 |
| Solyc10g074790.1.1 | Tomato | plasma membrane | 25.1 | 14.39 |
| Solyc02g091240.1.1 | Tomato | golgi, plasma membrane | 23.87 | 12.83 |
| CDY57768 | Canola | extracellular, plasma membrane, vacuole | 0.82 | 1.49 |
Protein Annotations
| EnsemblPlants:Solyc03g032080.2.1 | EnsemblPlantsGene:Solyc03g032080.2 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31651 | PANTHER:PTHR31651:SF3 | PFAM:PF03547 |
| TMHMM:TMhelix | UniParc:UPI00027677F6 | UniProt:K4BFH9 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | : |
Description
No Description!
Coordinates
chr3:+:4600196..4603407
Molecular Weight (calculated)
27189.1 Da
IEP (calculated)
9.547
GRAVY (calculated)
0.541
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVGGFYIWT YTYHLIRSSS VKFKAIKAEN ALKKPNMDLL DANEKSHLLQ HNDTENQMIK VCEVSSWSKI ARTLNKIVEE LLAPPTIAAI LGLIFGSITW
101: LKNLIIGNNA PLRVIQDTVK LLGDGTIPCI TLILGGNLTQ GLRKAKVKPM IIIAVVCVRY IFSPLIGILL LKSASKFGFL TSDPLYKFVL MIQYTLPPAM
201: NIGTMTQLFD VAQEECSVLF LWTYLAAVFA LTIWSTIFMW LLF
101: LKNLIIGNNA PLRVIQDTVK LLGDGTIPCI TLILGGNLTQ GLRKAKVKPM IIIAVVCVRY IFSPLIGILL LKSASKFGFL TSDPLYKFVL MIQYTLPPAM
201: NIGTMTQLFD VAQEECSVLF LWTYLAAVFA LTIWSTIFMW LLF
001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
Arabidopsis Description
PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.