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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g032080.2.1 Tomato golgi, plasma membrane 58.99 95.88
PGSC0003DMT400035511 Potato plasma membrane 72.66 70.86
CDY57768 Canola extracellular, plasma membrane, vacuole 21.52 63.43
CDY18579 Canola plasma membrane 63.04 63.2
CDX81425 Canola plasma membrane 62.53 62.85
CDY57767 Canola plasma membrane 62.78 62.78
CDY55102 Canola plasma membrane 62.78 62.78
Bra031803.1-P Field mustard plasma membrane 60.76 62.5
VIT_07s0031g02200.t01 Wine grape plasma membrane 66.58 62.47
AT5G65980.1 Thale cress plasma membrane 62.03 62.03
Bra002068.1-P Field mustard plasma membrane 60.25 60.56
CDY24342 Canola plasma membrane 60.0 60.31
CDY26812 Canola plasma membrane 59.75 60.05
AT2G17500.2 Thale cress plasma membrane 60.0 59.85
CDY30361 Canola golgi, plasma membrane 59.49 59.8
Bra037268.1-P Field mustard golgi, plasma membrane 59.49 59.8
CDY20805 Canola extracellular, plasma membrane 45.57 58.63
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 58.99 57.67
GSMUA_Achr9P21210_001 Banana plasma membrane 61.01 57.24
GSMUA_Achr10P... Banana golgi, plasma membrane 59.49 57.04
KRH28941 Soybean plasma membrane 58.73 55.37
KRH76521 Soybean plasma membrane 58.48 55.13
GSMUA_Achr10P... Banana golgi, plasma membrane 57.22 54.59
TraesCS5A01G354300.1 Wheat plasma membrane 56.96 54.09
TraesCS5D01G361500.1 Wheat plasma membrane 55.44 54.07
TraesCS5B01G356700.1 Wheat plasma membrane 56.96 53.96
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 55.44 53.55
Os09t0555100-00 Rice plasma membrane 56.96 53.19
Os09t0554300-01 Rice plasma membrane 57.47 53.04
KXG36159 Sorghum plasma membrane 55.7 53.01
HORVU5Hr1G087880.13 Barley plasma membrane 57.22 52.93
GSMUA_Achr5P15890_001 Banana golgi, plasma membrane 56.2 52.36
GSMUA_Achr4P25890_001 Banana plasma membrane 56.2 52.24
TraesCS6A01G421200.1 Wheat plasma membrane 50.89 48.67
KRH56032 Soybean extracellular, golgi, plasma membrane 14.68 47.54
TraesCS6B01G466900.1 Wheat plasma membrane 52.66 47.27
KXG34923 Sorghum plasma membrane 51.65 47.11
TraesCS4B01G322800.1 Wheat plasma membrane 48.86 46.84
TraesCS6D01G404400.1 Wheat plasma membrane 50.63 46.62
TraesCS4D01G319200.1 Wheat plasma membrane 48.61 46.49
OQU93318 Sorghum plasma membrane 48.86 46.06
HORVU6Hr1G094970.4 Barley golgi 49.11 44.8
PGSC0003DMT400046054 Potato plasma membrane 44.81 44.7
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 56.96 43.35
PGSC0003DMT400025706 Potato endoplasmic reticulum, plasma membrane, vacuole 43.54 42.26
Zm00001d040149_P001 Maize plasma membrane 27.09 41.96
Zm00001d021413_P002 Maize plasma membrane 45.82 40.22
Bra037193.1-P Field mustard plasma membrane 62.03 40.16
Zm00001d007499_P001 Maize plasma membrane 16.2 39.75
PGSC0003DMT400075596 Potato plasma membrane 20.25 39.02
PGSC0003DMT400048072 Potato plasma membrane 38.73 36.87
TraesCS5A01G494900.1 Wheat golgi, peroxisome, plasma membrane, plastid 46.58 35.73
HORVU4Hr1G082680.2 Barley cytosol, endoplasmic reticulum, plasma membrane 20.76 35.19
Zm00001d025364_P002 Maize plasma membrane 28.61 33.93
Zm00001d007109_P001 Maize cytosol, golgi, plastid 24.3 31.07
PGSC0003DMT400071229 Potato cytosol, golgi, plasma membrane 29.37 27.36
PGSC0003DMT400078752 Potato plasma membrane 29.11 25.44
Protein Annotations
EnsemblPlants:PGSC0003DMT400048041EnsemblPlantsGene:PGSC0003DMG400018668EntrezGene:102601683GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547PGSC:PGSC0003DMG400018668RefSeq:XP_006343325.1TMHMM:TMhelixUniParc:UPI000296A448UniProt:M1BLV5
MapMan:11.2.4.2MapMan:24.2.5.2.2::::
Description
Auxin:hydrogen symporter [Source:PGSC_GENE;Acc:PGSC0003DMG400018668]
Coordinates
chr3:+:3084832..3091586
Molecular Weight (calculated)
43563.6 Da
IEP (calculated)
8.460
GRAVY (calculated)
0.705
Length
395 amino acids
Sequence
(BLAST)
001: MGFWTLFEVA SMPILQMLLI SVLGALMATN YFNILHSDTR RSLNKIVFVV FTPSITFASL TKTVTLDDII SWWFMPINIG LTFLVGGILG WLVVKILKPE
101: VHLEGLIIAT CSTGNLGNLL LLVIPAICKE DGSPFGDHGI CASVGLSYVS FSMAVGGFYI WTYTYHLIRS SSVKFKAIKA ENALKKPNMD LVDANEKSHL
201: LQHDDTENQM IKVCEVSSWS KIARTLNKIV EELLAPPTIA AILGLIFGSI TWLKNLIIGS NAPLRVIQDT VKLLGDGTIP CITLILGGNL TQGLKKAKVK
301: PMIIIAVVCV RYIFSPLLGI LVLKAASKFG FLAADPLYKF VLMIQYTLPP AMNIGTMTQL FDVAQEECSV LFLWTYLAAA FALTIWSTIF MWLLF
Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Arabidopsis Description
PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.