Factsheet for TraesCS5A01G354300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G356700.1	Wheat	plasma membrane	95.91	95.68
HORVU5Hr1G087880.13	Barley	plasma membrane	95.67	93.21
Os09t0554300-01	Rice	plasma membrane	84.62	82.24
KXG36159	Sorghum	plasma membrane	81.49	81.69
TraesCS5D01G361600.2	Wheat	mitochondrion, plasma membrane	95.91	76.88
Os09t0555100-00	Rice	plasma membrane	76.68	75.41
Zm00001d021413_P002	Maize	plasma membrane	70.91	65.56
Zm00001d007499_P001	Maize	plasma membrane	24.76	63.98
GSMUA_Achr2P03670_001	Banana	golgi, plasma membrane, vacuole	61.78	63.61
GSMUA_Achr10P...	Banana	golgi, plasma membrane	62.74	63.35
GSMUA_Achr9P21210_001	Banana	plasma membrane	62.98	62.23
Zm00001d040149_P001	Maize	plasma membrane	36.54	59.61
AT5G65980.1	Thale cress	plasma membrane	56.49	59.49
CDY55102	Canola	plasma membrane	56.49	59.49
CDY57767	Canola	plasma membrane	56.49	59.49
GSMUA_Achr10P...	Banana	golgi, plasma membrane	59.13	59.42
CDX81425	Canola	plasma membrane	55.77	59.03
CDY18579	Canola	plasma membrane	55.77	58.88
Bra031803.1-P	Field mustard	plasma membrane	54.33	58.85
TraesCS6A01G421200.1	Wheat	plasma membrane	57.93	58.35
CDY57768	Canola	extracellular, plasma membrane, vacuole	18.51	57.46
Zm00001d025364_P002	Maize	plasma membrane	45.91	57.36
PGSC0003DMT400048041	Potato	plasma membrane	54.09	56.96
VIT_07s0031g02200.t01	Wine grape	plasma membrane	56.97	56.29
CDY24342	Canola	plasma membrane	52.88	55.98
Bra002068.1-P	Field mustard	plasma membrane	52.88	55.98
PGSC0003DMT400035511	Potato	plasma membrane	54.33	55.8
AT2G17500.2	Thale cress	plasma membrane	52.88	55.56
Bra037268.1-P	Field mustard	golgi, plasma membrane	52.4	55.47
CDY30361	Canola	golgi, plasma membrane	52.4	55.47
Solyc02g082450.2.1	Tomato	nucleus	53.85	55.31
CDY26812	Canola	plasma membrane	52.16	55.22
CDY20805	Canola	extracellular, plasma membrane	38.7	52.44
Solyc03g032080.2.1	Tomato	golgi, plasma membrane	30.53	52.26
KRH39407	Soybean	endoplasmic reticulum, plasma membrane, vacuole	50.96	51.83
KRH76521	Soybean	plasma membrane	50.72	50.36
Zm00001d007109_P001	Maize	cytosol, golgi, plastid	37.26	50.16
KRH28941	Soybean	plasma membrane	50.24	49.88
KRH56032	Soybean	extracellular, golgi, plasma membrane	14.18	48.36
TraesCS5A01G494900.1	Wheat	golgi, peroxisome, plasma membrane, plastid	48.08	38.84
Bra037193.1-P	Field mustard	plasma membrane	54.57	37.21
TraesCS5A01G267300.1	Wheat	extracellular	20.67	34.82
TraesCS4A01G132600.1	Wheat	golgi, plasma membrane, vacuole	26.44	27.3
TraesCS3A01G341400.1	Wheat	plasma membrane	27.4	26.39
TraesCS3A01G525200.1	Wheat	plasma membrane	28.37	26.34

Protein Annotations

EnsemblPlants:TraesCS5A01G354300.1	EnsemblPlantsGene:TraesCS5A01G354300	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF3	PFAM:PF03547
TMHMM:TMhelix	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:	:

Description

No Description!

Coordinates

chr5A:-:556889154..556892446

Molecular Weight (calculated)

45050.8 Da

IEP (calculated)

6.761

GRAVY (calculated)

0.526

Length

416 amino acids

Sequence
(BLAST)

001: MGFLSLLVVA SMPIVQVLLI GVIGAFLASG YSKVLTASAR RDMNKVVFTV FTPSLIFANL AKTVTLSDVI SWWFMPVNIA ITFLVGSALG WLACKILKPP
101: PHFRGLIMAF CSAGNLGNLL LIVVPAVCDE DGNPFGSDRN QCRSRGLSYS SLSMALGGLF IWTYTYSLMQ KSGKLYHKMQ SKSIQCPADS DEEHLEGFKA
201: GDEEAALPAS ARPEEQNEGS QIEAPLLSCE SDVANNKGFW TNLKEAVHQL IEELMAPPTI SAIIGFVVGL VPWLKSLIIG EGAPLRVIQD SLELMGNGTI
301: PCITLILGGN LTQGLRKSVL KRTVIMAIVC IRYVAMPVIG IAVVRVAHGV GFLPHDPLYR YVLMMQSALP PAMNIGTMAQ LFDVGQEECS VIFLWTYLVA
401: AVALTTWSTV FMSILS

Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)

001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS

Arabidopsis Description

PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.