Factsheet for TraesCS5A01G494900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid, plasma membrane

Predictor Summary:

plastid 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane, plastid
Any Predictor:	golgi, peroxisome, plasma membrane, plastid
ChloroP:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G322800.1	Wheat	plasma membrane	74.17	92.72
TraesCS4D01G319200.1	Wheat	plasma membrane	73.4	91.53
HORVU4Hr1G082680.2	Barley	cytosol, endoplasmic reticulum, plasma membrane	36.5	80.69
OQU93318	Sorghum	plasma membrane	58.06	71.36
GSMUA_Achr5P15890_001	Banana	golgi, plasma membrane	40.78	49.53
GSMUA_Achr4P25890_001	Banana	plasma membrane	40.58	49.18
TraesCS6A01G421200.1	Wheat	plasma membrane	39.03	48.67
CDY24342	Canola	plasma membrane	36.89	48.35
Bra002068.1-P	Field mustard	plasma membrane	36.89	48.35
CDY18579	Canola	plasma membrane	36.89	48.22
Bra037268.1-P	Field mustard	golgi, plasma membrane	36.7	48.09
CDX81425	Canola	plasma membrane	36.7	48.09
CDY26812	Canola	plasma membrane	36.7	48.09
CDY30361	Canola	golgi, plasma membrane	36.7	48.09
TraesCS5A01G354300.1	Wheat	plasma membrane	38.84	48.08
CDY57768	Canola	extracellular, plasma membrane, vacuole	12.43	47.76
CDY55102	Canola	plasma membrane	36.5	47.59
CDY57767	Canola	plasma membrane	36.5	47.59
AT2G17500.2	Thale cress	plasma membrane	36.5	47.47
Bra031803.1-P	Field mustard	plasma membrane	35.34	47.4
AT5G65980.1	Thale cress	plasma membrane	36.12	47.09
PGSC0003DMT400048041	Potato	plasma membrane	35.73	46.58
PGSC0003DMT400035511	Potato	plasma membrane	36.31	46.17
Solyc02g082450.2.1	Tomato	nucleus	35.15	44.69
CDY20805	Canola	extracellular, plasma membrane	26.41	44.3
VIT_07s0031g02200.t01	Wine grape	plasma membrane	35.53	43.47
KRH76521	Soybean	plasma membrane	34.37	42.24
KRH39407	Soybean	endoplasmic reticulum, plasma membrane, vacuole	33.4	42.05
KRH28941	Soybean	plasma membrane	33.59	41.29
Solyc03g032080.2.1	Tomato	golgi, plasma membrane	18.84	39.92
KRH56032	Soybean	extracellular, golgi, plasma membrane	8.74	36.89
TraesCS5A01G267300.1	Wheat	extracellular	15.92	33.2
Bra037193.1-P	Field mustard	plasma membrane	36.89	31.15
TraesCS3A01G525200.1	Wheat	plasma membrane	21.55	24.78
TraesCS3A01G341400.1	Wheat	plasma membrane	19.61	23.38
TraesCS4A01G132600.1	Wheat	golgi, plasma membrane, vacuole	18.06	23.08

Protein Annotations

EnsemblPlants:TraesCS5A01G494900.1	EnsemblPlantsGene:TraesCS5A01G494900	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF7	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:

Description

No Description!

Coordinates

chr5A:+:663281642..663284366

Molecular Weight (calculated)

56195.6 Da

IEP (calculated)

8.544

GRAVY (calculated)

0.207

Length

515 amino acids

Sequence
(BLAST)

001: MESIWLGLGV DRHARPDEQK RVRPQQPAKR SRRRMGSTAQ HSTAQQLGLF GQFFKAIRTR TISDLSRRLL QGKMRFWSLL AVAWLPVLQV LLAGGLGACL
101: ASSRFDVLTS DARRHINKVV YIVFVPSLVF SSLAGTVTLK DIISWWFMPV NMGIIFLIGA TLGWLAVKAL RPGAHLQGLV ISCSSAGNWG TIPLMIVPAI
201: CSEEDSPFGD ADTCNSLGLS YVSLSMALGN FFIWTHSYSV MKRSAQLYKK CGDPTTNLTK EENSGEAENG NHAAFLPLSS GEFHEDVESE PVSSSLPAND
301: VAASFMRCLR RAKDLLVEIL NELWSPPSVA ALVGFTVGAI DKLRPLITEE DAPLRVVQDT AKLLADAAIP CTVLILGGNL TKGRGRTTMK PLVVVSIIAI
401: RFVILPACGI GVVKAASELG FLPRSPLYRY VLLLQSTVPP AMSIGTIAQL FDVGEEECSI VFLWTHLVAS GRRCSCHSCP EDLFSKKILH QHICTNVFQA
501: LSSDNTNKIC PEMSN

Best Arabidopsis Sequence Match ( AT2G17500.1 )
(BLAST)

001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV

Arabidopsis Description

PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.