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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30361 Canola golgi, plasma membrane 100.0 100.0
CDY26812 Canola plasma membrane 99.49 99.49
Bra002068.1-P Field mustard plasma membrane 93.89 93.89
AT2G17500.2 Thale cress plasma membrane 90.84 90.15
Bra031803.1-P Field mustard plasma membrane 64.12 65.62
PGSC0003DMT400035511 Potato plasma membrane 63.1 61.23
Solyc02g082450.2.1 Tomato nucleus 62.34 60.49
PGSC0003DMT400048041 Potato plasma membrane 59.8 59.49
Solyc03g032080.2.1 Tomato golgi, plasma membrane 36.13 58.44
VIT_07s0031g02200.t01 Wine grape plasma membrane 62.09 57.96
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 55.22 53.71
GSMUA_Achr10P... Banana golgi, plasma membrane 55.73 53.16
TraesCS5B01G356700.1 Wheat plasma membrane 55.98 52.76
KRH28941 Soybean plasma membrane 55.98 52.51
TraesCS5A01G354300.1 Wheat plasma membrane 55.47 52.4
TraesCS5D01G361500.1 Wheat plasma membrane 53.94 52.35
HORVU5Hr1G087880.13 Barley plasma membrane 56.49 51.99
TraesCS6A01G421200.1 Wheat plasma membrane 54.45 51.82
KXG36159 Sorghum plasma membrane 54.71 51.81
KRH76521 Soybean plasma membrane 55.22 51.79
GSMUA_Achr10P... Banana golgi, plasma membrane 54.45 51.69
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 52.67 50.61
Os09t0554300-01 Rice plasma membrane 54.96 50.47
GSMUA_Achr9P21210_001 Banana plasma membrane 53.94 50.36
TraesCS6D01G404400.1 Wheat plasma membrane 54.45 49.88
Os09t0555100-00 Rice plasma membrane 53.69 49.88
TraesCS6B01G466900.1 Wheat plasma membrane 55.22 49.32
GSMUA_Achr4P25890_001 Banana plasma membrane 52.42 48.47
KXG34923 Sorghum plasma membrane 52.93 48.04
TraesCS4B01G322800.1 Wheat plasma membrane 50.13 47.82
GSMUA_Achr5P15890_001 Banana golgi, plasma membrane 50.89 47.17
TraesCS4D01G319200.1 Wheat plasma membrane 49.36 46.97
HORVU6Hr1G094970.4 Barley golgi 51.65 46.88
OQU93318 Sorghum plasma membrane 47.58 44.63
KRH56032 Soybean extracellular, golgi, plasma membrane 13.74 44.26
Zm00001d007499_P001 Maize plasma membrane 17.56 42.86
Bra037193.1-P Field mustard plasma membrane 66.41 42.79
Bra015736.1-P Field mustard golgi, plasma membrane, vacuole 41.73 42.16
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 55.47 42.0
HORVU4Hr1G082680.2 Barley cytosol, endoplasmic reticulum, plasma membrane 24.17 40.77
Bra008264.1-P Field mustard golgi, plasma membrane, vacuole 41.22 40.7
Zm00001d021413_P002 Maize plasma membrane 45.8 40.0
Zm00001d040149_P001 Maize plasma membrane 25.7 39.61
Bra003716.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 38.93 39.43
Bra025857.1-P Field mustard plasma membrane 37.91 36.97
TraesCS5A01G494900.1 Wheat golgi, peroxisome, plasma membrane, plastid 48.09 36.7
Zm00001d025364_P002 Maize plasma membrane 29.52 34.83
Zm00001d007109_P001 Maize cytosol, golgi, plastid 24.68 31.39
Bra030441.1-P Field mustard golgi, plasma membrane, plastid 27.99 26.0
Bra014265.1-P Field mustard plasma membrane 28.5 25.99
Bra016159.1-P Field mustard golgi, plasma membrane 25.95 22.22
Protein Annotations
EnsemblPlants:Bra037268.1EnsemblPlants:Bra037268.1-PEnsemblPlantsGene:Bra037268GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547TMHMM:TMhelixUniParc:UPI0002541DFFUniProt:M4F857MapMan:11.2.4.2MapMan:24.2.5.2.2
Description
AT2G17500 (E=1e-208) | auxin efflux carrier family protein
Coordinates
chrA09:+:4646932..4648924
Molecular Weight (calculated)
43098.0 Da
IEP (calculated)
7.270
GRAVY (calculated)
0.641
Length
393 amino acids
Sequence
(BLAST)
001: MGFWSLLEVA SMPVIQVLII SLVGAYLATD RCKLFPVEAR NSMNKVVFVI FAPALMFANL AQTVTLQDMV SWWFMPVNMG LTFLIGGLLG WMVVKILKPP
101: PYLEGLIVAT CSSGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKFKEMEE SEKTAIKSSN SDLEADHKTK
201: LLGAPEGELV KKETGFWRKG VDFLHEILEE LRAPPTVGAI IGFIFGAVTW LRNLIIGDDA PLRIVQATAK LLGDGTIPCM TIILGGNLIQ GLRSSAVKPV
301: VVLGIVCVRY IILPIIGIGV VKTAESFGFL PADPLFQYVL MLQFTLPPAM NIGTMTQLYN VGQDECSVLM LWTYLIAILA LTVWSTIFLH LLV
Best Arabidopsis Sequence Match ( AT2G17500.2 )
(BLAST)
001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
Arabidopsis Description
PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.