Factsheet for Bra015736.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87589	Canola	golgi, plasma membrane, vacuole	98.97	98.97
AT1G76520.2	Thale cress	plasma membrane	89.72	89.49
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	91.52	89.45
Bra003716.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	88.69	88.92
AT1G76530.1	Thale cress	plasma membrane	82.01	76.87
Bra025857.1-P	Field mustard	plasma membrane	66.32	64.02
KRH38085	Soybean	extracellular	7.71	58.82
TraesCS5D01G275200.1	Wheat	plasma membrane	44.47	55.99
PGSC0003DMT400025706	Potato	endoplasmic reticulum, plasma membrane, vacuole	57.33	54.79
KRH07852	Soybean	golgi, plasma membrane, vacuole	16.2	54.78
Solyc04g082830.2.1	Tomato	plasma membrane	55.27	54.29
KRH76489	Soybean	endoplasmic reticulum, plasma membrane, vacuole	55.78	52.29
KRH28961	Soybean	golgi, plasma membrane, vacuole	55.01	51.57
VIT_04s0044g01870.t01	Wine grape	plasma membrane	49.61	50.79
VIT_04s0044g01890.t01	Wine grape	endoplasmic reticulum, extracellular	17.22	50.38
Solyc12g095750.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	53.73	49.88
GSMUA_Achr3P03690_001	Banana	plasma membrane	53.47	49.29
KRH39386	Soybean	golgi, plasma membrane, vacuole	52.44	49.28
KRH34529	Soybean	golgi, plasma membrane	50.64	49.25
KRH07859	Soybean	golgi, plasma membrane, vacuole	52.19	49.03
EER99100	Sorghum	golgi, plasma membrane, vacuole	51.93	48.79
EER99101	Sorghum	golgi, plasma membrane, vacuole	51.67	48.55
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	50.9	48.18
VIT_04s0044g01860.t01	Wine grape	golgi, plasma membrane, vacuole	51.16	47.61
KXG35918	Sorghum	plasma membrane	49.87	46.86
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	45.5	46.7
VIT_04s0044g01850.t01	Wine grape	golgi, plasma membrane, vacuole	49.36	45.93
VIT_04s0044g01880.t01	Wine grape	plastid	53.98	45.75
KRG92281	Soybean	plasma membrane	48.07	45.72
KRH66552	Soybean	plasma membrane	49.61	45.52
TraesCS5A01G267300.1	Wheat	extracellular	28.79	45.34
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	43.7	45.09
PGSC0003DMT400075596	Potato	plasma membrane	22.88	43.41
KRG92282	Soybean	plasma membrane	28.28	42.47
Bra031803.1-P	Field mustard	plasma membrane	41.39	41.93
Bra037268.1-P	Field mustard	golgi, plasma membrane	42.16	41.73
Bra002068.1-P	Field mustard	plasma membrane	41.9	41.48
KRH48800	Soybean	plasma membrane	44.47	41.39
KRH48798	Soybean	plasma membrane	42.93	39.95
KRH34530	Soybean	cytosol, endoplasmic reticulum, plasma membrane	30.59	38.02
KRH07851	Soybean	plasma membrane	28.53	37.37
HORVU5Hr1G073670.1	Barley	cytosol	50.9	36.94
KRG89678	Soybean	plasma membrane	18.77	36.5
Bra030441.1-P	Field mustard	golgi, plasma membrane, plastid	29.82	27.42
Bra014265.1-P	Field mustard	plasma membrane	29.82	26.91
Bra037193.1-P	Field mustard	plasma membrane	41.65	26.56
Bra016159.1-P	Field mustard	golgi, plasma membrane	30.85	26.14
Zm00001d024842_P002	Maize	plasma membrane	17.74	22.33

Protein Annotations

EnsemblPlants:Bra015736.1	EnsemblPlants:Bra015736.1-P	EnsemblPlantsGene:Bra015736	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6
PFAM:PF03547	SEG:seg	TMHMM:TMhelix	UniParc:UPI00025420DA	UniProt:M4DGW0	MapMan:11.2.4.2
MapMan:24.2.5.2.2	:	:	:	:	:

Description

AT1G76520 (E=2e-195) | auxin efflux carrier family protein

Coordinates

chrA07:+:21095859..21097678

Molecular Weight (calculated)

42462.3 Da

IEP (calculated)

9.215

GRAVY (calculated)

0.608

Length

389 amino acids

Sequence
(BLAST)

001: MMKLLNLFIT SSKPVVEILL ITIVGFYLAL DGVNLLGQDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLIVG CCAAGNLGNM PLIIVPAICK ERGGPFGDPE NCQKYGMGYV ALSMAMGSVY IWTYVYNLMR VLNSPIETQP SIESNYDTCK VPLIPSKEEE
201: DNQKAGRWDR IKRRIVSLSE KVNLRTIFAP STIAAMIALV IGLITPLRKL IIGNGAPLGV LQDSVTLVGD GAIPAMTLII GGNLLKGMRS SGMKKSSIIG
301: VLVARYILLP ISGVLIVRGA YKLDLITSEP LYQFVLLIQY AVPPAMNLGT ITQLFGAGES ECSVIMLWTY ALASVSLTAW PTFFMWLVA

Best Arabidopsis Sequence Match ( AT1G76520.1 )
(BLAST)

001: MVKLLELFIT SSKPVVEILL ITSVGFYMAL DGVNLLGHDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA

Arabidopsis Description

PILS3Protein PIN-LIKES 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.