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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G267300.1 Wheat extracellular 47.23 72.47
TraesCS5D01G275200.1 Wheat plasma membrane 55.94 68.61
EER99100 Sorghum golgi, plasma membrane, vacuole 74.93 68.6
EER99101 Sorghum golgi, plasma membrane, vacuole 74.67 68.36
HORVU5Hr1G073630.3 Barley golgi, plasma membrane, vacuole 72.82 67.15
KXG35918 Sorghum plasma membrane 72.82 66.67
Zm00001d020953_P001 Maize golgi, plasma membrane, vacuole 73.35 66.51
TraesCS5B01G267800.2 Wheat golgi, plasma membrane, vacuole 56.73 57.03
KRH38085 Soybean extracellular 7.39 54.9
HORVU5Hr1G073670.1 Barley cytosol 72.82 51.49
GSMUA_Achr3P03690_001 Banana plasma membrane 56.2 50.47
VIT_04s0044g01890.t01 Wine grape endoplasmic reticulum, extracellular 17.15 48.87
CDY29492 Canola plasma membrane 48.55 48.04
VIT_04s0044g01870.t01 Wine grape plasma membrane 48.02 47.89
PGSC0003DMT400025706 Potato endoplasmic reticulum, plasma membrane, vacuole 50.92 47.42
Solyc04g082830.2.1 Tomato plasma membrane 49.08 46.97
KRH39386 Soybean golgi, plasma membrane, vacuole 50.13 45.89
Bra025857.1-P Field mustard plasma membrane 48.55 45.66
AT1G76520.2 Thale cress plasma membrane 46.97 45.64
Bra015736.1-P Field mustard golgi, plasma membrane, vacuole 46.7 45.5
CDX68094 Canola endoplasmic reticulum, plasma membrane, vacuole 46.44 45.36
Bra003716.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 46.44 45.36
CDX87589 Canola golgi, plasma membrane, vacuole 46.44 45.24
CDY20402 Canola endoplasmic reticulum, plasma membrane, vacuole 45.65 44.7
Solyc12g095750.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 48.81 44.15
KRH07859 Soybean golgi, plasma membrane, vacuole 47.76 43.72
Solyc02g037550.2.1 Tomato plasma membrane 45.65 43.69
Bra008264.1-P Field mustard golgi, plasma membrane, vacuole 45.65 43.47
VIT_04s0044g01850.t01 Wine grape golgi, plasma membrane, vacuole 47.76 43.3
CDX85953 Canola endoplasmic reticulum, plasma membrane, vacuole 41.69 43.29
PGSC0003DMT400046054 Potato plasma membrane 45.12 43.18
KRH76489 Soybean endoplasmic reticulum, plasma membrane, vacuole 47.23 43.13
KRH28961 Soybean golgi, plasma membrane, vacuole 46.97 42.89
KRH34529 Soybean golgi, plasma membrane 44.85 42.5
VIT_04s0044g01860.t01 Wine grape golgi, plasma membrane, vacuole 46.44 42.11
AT1G76530.1 Thale cress plasma membrane 45.91 41.93
KRG92281 Soybean plasma membrane 43.54 40.34
VIT_04s0044g01880.t01 Wine grape plastid 48.81 40.3
CDY45981 Canola golgi, plasma membrane, vacuole 16.09 39.61
AT1G20925.1 Thale cress plasma membrane 48.81 39.19
KRH66552 Soybean plasma membrane 43.8 39.15
CDY31514 Canola mitochondrion, plasma membrane 48.28 38.28
Solyc03g031990.2.1 Tomato golgi, plasma membrane, vacuole 41.69 38.07
PGSC0003DMT400048072 Potato plasma membrane 41.16 37.59
KRH07851 Soybean plasma membrane 29.29 37.37
KRH48800 Soybean plasma membrane 41.16 37.32
KRG92282 Soybean plasma membrane 24.54 35.91
PGSC0003DMT400075596 Potato plasma membrane 19.26 35.61
Os09t0554300-01 Rice plasma membrane 37.99 33.64
Os09t0555100-00 Rice plasma membrane 37.47 33.57
KRH48798 Soybean plasma membrane 36.94 33.49
KRH07852 Soybean golgi, plasma membrane, vacuole 9.76 32.17
KRG89678 Soybean plasma membrane 16.89 32.0
KRH34530 Soybean cytosol, endoplasmic reticulum, plasma membrane 23.22 28.11
Os01t0818000-01 Rice plasma membrane 25.59 22.45
Os05t0481900-01 Rice golgi, plasma membrane, plastid 25.86 22.43
Os08t0191000-01 Rice golgi, plasma membrane, plastid 25.86 21.54
Protein Annotations
EMBL:AK073345EnsemblPlants:Os09t0491740-01EnsemblPlantsGene:Os09g0491740GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF6
PFAM:PF03547ProteinID:BAH94644.1ProteinID:BAT08746.1TMHMM:TMhelixUniParc:UPI000188AE21UniProt:B7EM10
MapMan:11.2.4.2MapMan:24.2.5.2.2::::
Description
PIN likes 1Auxin efflux carrier domain containing protein. (Os09t0491740-01)
Coordinates
chr9:-:18978153..18983471
Molecular Weight (calculated)
40480.1 Da
IEP (calculated)
9.018
GRAVY (calculated)
0.557
Length
379 amino acids
Sequence
(BLAST)
001: MGLLELFITA CVPVLNMLLV TGVGSFLATD FVGILNKDAR KYLNNIVFYV FNPSLVATYL AQTITLEGLA KLWFMPVNIL LACTFGLILG WIVVHVTRAP
101: ARLRGLILGC CSAGNWGNIF LIIIPALCKE KGSPFGAPDV CHTYGLAYSS LSMALGAVFL WTVAYNIMRA TSKVADEGNA RTNDTKVSNS GSSTGTASEE
201: NLSIPNDNNQ CTLPLISNSS VPSSKTKVTL SERAKRFVSS MFGAIDFKKI FAPSTIAVII GFIIGGTPLI RNAIIGENAP LRVIHESADL IGGGAIPSVT
301: LIMGGNLLNG LRGEASVQPS VIASVIVVRY ILLPSLGTLL VKSAVHLGLI HPDPLYQFIL LLQYAVPPAM NIGRKERME
Best Arabidopsis Sequence Match ( AT1G20925.1 )
(BLAST)
001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA
Arabidopsis Description
PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.