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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45981 Canola golgi, plasma membrane, vacuole 38.69 100.0
CDY20402 Canola endoplasmic reticulum, plasma membrane, vacuole 96.98 99.74
Bra015736.1-P Field mustard golgi, plasma membrane, vacuole 89.45 91.52
AT1G76520.2 Thale cress plasma membrane 85.43 87.18
Bra003716.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 84.67 86.86
AT1G76530.1 Thale cress plasma membrane 77.14 73.98
Bra025857.1-P Field mustard plasma membrane 63.82 63.03
TraesCS5D01G275200.1 Wheat plasma membrane 43.47 55.99
KRH38085 Soybean extracellular 7.04 54.9
PGSC0003DMT400025706 Potato endoplasmic reticulum, plasma membrane, vacuole 55.78 54.55
KRH07852 Soybean golgi, plasma membrane, vacuole 15.58 53.91
Solyc04g082830.2.1 Tomato plasma membrane 53.52 53.79
VIT_04s0044g01890.t01 Wine grape endoplasmic reticulum, extracellular 17.59 52.63
VIT_04s0044g01870.t01 Wine grape plasma membrane 49.5 51.84
KRH76489 Soybean endoplasmic reticulum, plasma membrane, vacuole 53.52 51.33
KRH28961 Soybean golgi, plasma membrane, vacuole 52.76 50.6
Solyc12g095750.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 53.27 50.6
GSMUA_Achr3P03690_001 Banana plasma membrane 52.26 49.29
KRH34529 Soybean golgi, plasma membrane 49.25 49.0
HORVU5Hr1G073630.3 Barley golgi, plasma membrane, vacuole 50.0 48.42
KRH39386 Soybean golgi, plasma membrane, vacuole 50.0 48.07
KRH07859 Soybean golgi, plasma membrane, vacuole 50.0 48.07
EER99100 Sorghum golgi, plasma membrane, vacuole 49.5 47.58
VIT_04s0044g01860.t01 Wine grape golgi, plasma membrane, vacuole 49.75 47.37
EER99101 Sorghum golgi, plasma membrane, vacuole 49.25 47.34
VIT_04s0044g01880.t01 Wine grape plastid 53.77 46.62
KXG35918 Sorghum plasma membrane 48.24 46.38
KRG92281 Soybean plasma membrane 47.49 46.21
VIT_04s0044g01850.t01 Wine grape golgi, plasma membrane, vacuole 47.99 45.69
Os09t0491740-01 Rice golgi, plasma membrane, vacuole 43.47 45.65
TraesCS5B01G267800.2 Wheat golgi, plasma membrane, vacuole 42.46 44.83
KRH66552 Soybean plasma membrane 47.74 44.81
TraesCS5A01G267300.1 Wheat extracellular 27.64 44.53
PGSC0003DMT400075596 Potato plasma membrane 22.86 44.39
KRG92282 Soybean plasma membrane 27.64 42.47
Bra031803.1-P Field mustard plasma membrane 40.2 41.67
KRH48800 Soybean plasma membrane 43.72 41.63
Bra037268.1-P Field mustard golgi, plasma membrane 40.7 41.22
Bra002068.1-P Field mustard plasma membrane 40.7 41.22
KRH48798 Soybean plasma membrane 41.96 39.95
KRH34530 Soybean cytosol, endoplasmic reticulum, plasma membrane 29.65 37.7
HORVU5Hr1G073670.1 Barley cytosol 50.0 37.13
KRH07851 Soybean plasma membrane 27.39 36.7
KRG89678 Soybean plasma membrane 17.84 35.5
Bra030441.1-P Field mustard golgi, plasma membrane, plastid 29.4 27.66
Bra016159.1-P Field mustard golgi, plasma membrane 31.41 27.23
Bra014265.1-P Field mustard plasma membrane 29.4 27.15
Bra037193.1-P Field mustard plasma membrane 40.2 26.23
Zm00001d024842_P002 Maize plasma membrane 17.84 22.98
Protein Annotations
EnsemblPlants:Bra008264.1EnsemblPlants:Bra008264.1-PEnsemblPlantsGene:Bra008264GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF6
PFAM:PF03547SEG:segTMHMM:TMhelixUniParc:UPI0002545F26UniProt:M4CVL7MapMan:11.2.4.2
MapMan:24.2.5.2.2:::::
Description
AT1G76520 (E=2e-192) | auxin efflux carrier family protein
Coordinates
chrA02:+:14204658..14206704
Molecular Weight (calculated)
43417.4 Da
IEP (calculated)
8.909
GRAVY (calculated)
0.617
Length
398 amino acids
Sequence
(BLAST)
001: MFADISFEEG EMMKLLHLFI TSSKPVVEIL LITTVGFYMA LDGVNLLGQD ARKFLNNIVF YVFSPSLIGS RLANSVTYES LMQMWFMPVN VLLTFIIGSF
101: LGWIVILITK PPSHLRGLIV GCCAAGNLGN MPLIIVPAVC KEKGGPFGDP ENCQKYGVGY VALSMAMGSI YIWTYVYNLM RVLTNSPIET QPSIESSCKV
201: PLISSKEEED NQKVGRWDKV KRRMVSLSGK VNLRTIFAPS TIAAMIALVV GLITPIRKLI IGNGAPLGVL QDSVTLVGDG AIPAMTLIIG GNLLKGMRSS
301: GMKKSSIVGV LVARYIFLPI SGVLIVRGAY KFDLITSEPL YQFVLLLQYA VPPAMNLGTI TQLFGAGESE CSVILLWTYA LASVSLTVWP TFFMWLVA
Best Arabidopsis Sequence Match ( AT1G76520.1 )
(BLAST)
001: MVKLLELFIT SSKPVVEILL ITSVGFYMAL DGVNLLGHDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA
Arabidopsis Description
PILS3Protein PIN-LIKES 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.