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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29492 Canola plasma membrane 86.6 91.12
CDY31514 Canola mitochondrion, plasma membrane 85.86 72.38
Bra015736.1-P Field mustard golgi, plasma membrane, vacuole 64.02 66.32
Bra008264.1-P Field mustard golgi, plasma membrane, vacuole 63.03 63.82
AT1G20925.1 Thale cress plasma membrane 74.19 63.35
Bra003716.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 59.55 61.86
KRH38085 Soybean extracellular 6.95 54.9
TraesCS5D01G275200.1 Wheat plasma membrane 39.95 52.1
PGSC0003DMT400025706 Potato endoplasmic reticulum, plasma membrane, vacuole 51.86 51.35
VIT_04s0044g01890.t01 Wine grape endoplasmic reticulum, extracellular 16.63 50.38
Solyc04g082830.2.1 Tomato plasma membrane 48.88 49.75
Os09t0491740-01 Rice golgi, plasma membrane, vacuole 45.66 48.55
GSMUA_Achr3P03690_001 Banana plasma membrane 49.38 47.16
VIT_04s0044g01870.t01 Wine grape plasma membrane 44.42 47.11
KRH39386 Soybean golgi, plasma membrane, vacuole 46.65 45.41
KRH76489 Soybean endoplasmic reticulum, plasma membrane, vacuole 45.91 44.58
KRH28961 Soybean golgi, plasma membrane, vacuole 45.91 44.58
EER99100 Sorghum golgi, plasma membrane, vacuole 45.66 44.44
KRH34529 Soybean golgi, plasma membrane 43.92 44.25
Solyc12g095750.1.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 45.91 44.15
TraesCS5A01G267300.1 Wheat extracellular 27.05 44.13
HORVU5Hr1G073630.3 Barley golgi, plasma membrane, vacuole 44.91 44.04
VIT_04s0044g01860.t01 Wine grape golgi, plasma membrane, vacuole 45.66 44.02
KRH07859 Soybean golgi, plasma membrane, vacuole 45.16 43.96
KXG35918 Sorghum plasma membrane 45.16 43.96
VIT_04s0044g01850.t01 Wine grape golgi, plasma membrane, vacuole 45.41 43.78
EER99101 Sorghum golgi, plasma membrane, vacuole 44.91 43.72
KRH66552 Soybean plasma membrane 43.18 41.04
KRG92281 Soybean plasma membrane 40.94 40.34
VIT_04s0044g01880.t01 Wine grape plastid 45.66 40.09
KRH07852 Soybean golgi, plasma membrane, vacuole 11.41 40.0
TraesCS5B01G267800.2 Wheat golgi, plasma membrane, vacuole 36.48 38.99
Bra031803.1-P Field mustard plasma membrane 36.97 38.8
KRH48800 Soybean plasma membrane 39.95 38.52
KRG89678 Soybean plasma membrane 19.11 38.5
KRH07851 Soybean plasma membrane 28.04 38.05
Bra037268.1-P Field mustard golgi, plasma membrane 36.97 37.91
Bra002068.1-P Field mustard plasma membrane 36.72 37.66
PGSC0003DMT400075596 Potato plasma membrane 18.61 36.59
KRH48798 Soybean plasma membrane 37.72 36.36
KRG92282 Soybean plasma membrane 21.84 33.98
HORVU5Hr1G073670.1 Barley cytosol 44.91 33.77
KRH34530 Soybean cytosol, endoplasmic reticulum, plasma membrane 24.07 30.99
Bra030441.1-P Field mustard golgi, plasma membrane, plastid 28.29 26.95
Bra014265.1-P Field mustard plasma membrane 28.78 26.91
Bra037193.1-P Field mustard plasma membrane 37.47 24.75
Bra016159.1-P Field mustard golgi, plasma membrane 27.54 24.18
Zm00001d024842_P002 Maize plasma membrane 17.12 22.33
Protein Annotations
MapMan:11.2.4.2MapMan:24.2.5.2.2EnsemblPlantsGene:Bra025857EnsemblPlants:Bra025857.1EnsemblPlants:Bra025857.1-PGO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0005789GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4EAP8InterPro:Mem_trans
PFAM:PF03547PANTHER:PTHR31651PANTHER:PTHR31651:SF6TMHMM:TMhelixUniParc:UPI000253EFE4SEG:seg
Description
AT1G76520 (E=2e-111) | auxin efflux carrier family protein
Coordinates
chrA06:+:8471594..8473376
Molecular Weight (calculated)
44317.5 Da
IEP (calculated)
9.387
GRAVY (calculated)
0.596
Length
403 amino acids
Sequence
(BLAST)
001: MKLLDLFITS SIPVGKILVI TGIGFYLALD RVNILNQDAR KQLNNIVFYV FSPSLVASSL AETITYESLV KMWFMPLNVV LTFIIGSFLG WLVIKITKPP
101: SHLRGIIVGC CAAGNEKCFV TFFDSLVMKM QNPTGNLGNM PLIIIPAICN EKGSPFGDPE TCEKYGLGYV ALSMAIGSIC IWTYVYNLMR VLARETPIII
201: GTSSTVPLIP TKVVQVEEQF GTWSKIKQRV CSATENINLG TIFAPSTIAA LIALGIGLIP TLRKLLIGNT APLRVIEDSV SLLGEGTIPL LTLIIGGNLL
301: KGLRGSGMHK SVILGVVVVR YVLLPIIGVL IVQGAHYLGL ITSEPLYQFV LLLQYVVPPA MNLGSFVLPE SEKYYKNTHH TVFLIDFTFS RRYNNSTIWV
401: RRM
Best Arabidopsis Sequence Match ( AT1G20925.1 )
(BLAST)
001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA
Arabidopsis Description
PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.