Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • nucleus 1
  • golgi 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70057 Canola golgi, plasma membrane, plastid 98.82 98.82
AT5G01990.1 Thale cress golgi, plasma membrane, vacuole 89.6 87.94
Bra014265.1-P Field mustard plasma membrane 89.13 87.47
KRH00524 Soybean plasma membrane 74.47 76.09
KRH40632 Soybean plasma membrane 74.47 76.09
VIT_08s0056g00310.t01 Wine grape cytosol, golgi, plasma membrane 72.81 76.05
GSMUA_Achr3P09660_001 Banana golgi, plasma membrane 63.83 71.05
PGSC0003DMT400071229 Potato cytosol, golgi, plasma membrane 70.21 70.05
Solyc10g074790.1.1 Tomato plasma membrane 69.27 69.1
GSMUA_Achr9P16830_001 Banana plasma membrane 66.43 67.55
TraesCS4B01G172100.1 Wheat golgi, plasma membrane, vacuole 62.41 64.55
TraesCS4A01G132600.1 Wheat golgi, plasma membrane, vacuole 60.52 63.52
TraesCS3B01G373500.1 Wheat plasma membrane 64.54 63.19
TraesCS3A01G341400.1 Wheat plasma membrane 64.3 62.96
TraesCS3D01G335100.1 Wheat plasma membrane 64.3 62.96
EES01656 Sorghum plasma membrane 64.3 62.82
Zm00001d043083_P003 Maize plasma membrane 63.83 62.36
HORVU3Hr1G080640.5 Barley plasma membrane 63.59 62.27
TraesCS4D01G174100.2 Wheat golgi, plasma membrane, vacuole 61.7 61.85
Os01t0818000-01 Rice plasma membrane 63.12 61.81
Os05t0481900-01 Rice golgi, plasma membrane, plastid 61.7 59.73
HORVU4Hr1G050910.5 Barley golgi, plasma membrane, plastid 62.41 55.46
Bra016159.1-P Field mustard golgi, plasma membrane 37.35 34.42
Bra031803.1-P Field mustard plasma membrane 27.42 30.21
Bra003716.1-P Field mustard endoplasmic reticulum, plasma membrane, vacuole 27.66 30.15
Bra015736.1-P Field mustard golgi, plasma membrane, vacuole 27.42 29.82
Bra008264.1-P Field mustard golgi, plasma membrane, vacuole 27.66 29.4
Bra025857.1-P Field mustard plasma membrane 26.95 28.29
Bra002068.1-P Field mustard plasma membrane 26.24 28.24
Bra037268.1-P Field mustard golgi, plasma membrane 26.0 27.99
Bra037193.1-P Field mustard plasma membrane 27.19 18.85
Protein Annotations
EnsemblPlants:Bra030441.1EnsemblPlants:Bra030441.1-PEnsemblPlantsGene:Bra030441GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31419PANTHER:PTHR31419:SF1
PFAM:PF03547SEG:segTMHMM:TMhelixUniParc:UPI00025479F0UniProt:M4ENS1MapMan:11.2.4.2
MapMan:24.2.5.2.2:::::
Description
AT5G01990 (E=3e-195) | auxin efflux carrier family protein
Coordinates
chrA05:+:11229426..11231295
Molecular Weight (calculated)
46084.8 Da
IEP (calculated)
8.804
GRAVY (calculated)
0.626
Length
423 amino acids
Sequence
(BLAST)
001: MITRILSDLM DMPTAVAAGE SVLGTIKIAV MPIAKVFTMC FLGLLMASKY VNILPPSGRK LLNGLVFTLL LPCLIFSQLG QAVTLHKMLE WWFIPVNVVL
101: GTISGSLIGF LVATIIRPPY PYFKFTIIQI GVGNIGNVPL VLLAALCRDK SNPFGDSEKC SIDGTAYISF GQWVGAIILY TYVYQMFTPP PEGFDGEEEN
201: LPLKNAASPE QVPLLTHNYP KDTPPAQARL PVQSAEPRER EDSKITHIFV YLYEKLKLKQ IIQPAIIASI LAMILGAIPF TKKLIFTNNS PLFFFTDSCM
301: ILGDAMIPCI LLALGGNLIN GPGSSKLGFK TTAAIIIGRL VLVPPAGLGI VTLADKLGFL PAGDKMFRFV LLLQHTMPTS VLSGAVANLR GCGRESAAVL
401: FWVHIFAIFS MAGWMVLYIN ILF
Best Arabidopsis Sequence Match ( AT5G01990.1 )
(BLAST)
001: MIARILAALA DSMEMPVAAG GGSVLGTIKI AVMPIAKVFT MCFLGLLMAS KYVNILPPSG RKLLNGLVFS LLLPCLIFSQ LGQAVTLQKM LQWWFIPVNV
101: VLGTISGSII GFIVASIVRP PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII LYTYVYQMFA PPPEGFDAEE
201: ENLALKTLPV DAAPEQVPLL TQNFPKDFSP TQDLLPVQST EPRGRGVSRK GKIAQIFVFL YEKLKLKQIV QPAIVASILA MILGAIPFTK KLIFTNGAPL
301: FFFTDSCMIL GDAMIPCILL ALGGNLINGP GSSKLGFKTT AAIIIGRLVL VPPVGLGIVT VADKLGFLPA DDKMFRFVLL LQHTMPTSVL SGAVANLRGC
401: GRESAAVLFW VHIFAIFSMA GWMVLYINIL F
Arabidopsis Description
PILS6Protein PIN-LIKES 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN2]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.