Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043083_P003 | Maize | plasma membrane | 96.54 | 96.54 |
| Os01t0818000-01 | Rice | plasma membrane | 89.84 | 90.05 |
| TraesCS3B01G373500.1 | Wheat | plasma membrane | 86.84 | 87.04 |
| TraesCS3D01G335100.1 | Wheat | plasma membrane | 86.61 | 86.81 |
| TraesCS3A01G341400.1 | Wheat | plasma membrane | 86.37 | 86.57 |
| HORVU3Hr1G080640.5 | Barley | plasma membrane | 85.91 | 86.11 |
| GSMUA_Achr3P09660_001 | Banana | golgi, plasma membrane | 64.9 | 73.95 |
| GSMUA_Achr9P16830_001 | Banana | plasma membrane | 69.05 | 71.88 |
| VIT_08s0056g00310.t01 | Wine grape | cytosol, golgi, plasma membrane | 64.43 | 68.89 |
| Solyc10g074790.1.1 | Tomato | plasma membrane | 64.9 | 66.27 |
| KRH40632 | Soybean | plasma membrane | 63.28 | 66.18 |
| PGSC0003DMT400071229 | Potato | cytosol, golgi, plasma membrane | 64.2 | 65.57 |
| KRH00524 | Soybean | plasma membrane | 62.59 | 65.46 |
| CDY03621 | Canola | cytosol, golgi, plasma membrane | 64.9 | 65.2 |
| CDY58937 | Canola | cytosol, golgi, plasma membrane | 64.43 | 64.73 |
| Bra014265.1-P | Field mustard | plasma membrane | 64.43 | 64.73 |
| CDY01222 | Canola | golgi, plasma membrane, plastid | 62.82 | 64.61 |
| Bra030441.1-P | Field mustard | golgi, plasma membrane, plastid | 62.82 | 64.3 |
| CDY70057 | Canola | golgi, plasma membrane, plastid | 62.59 | 64.07 |
| AT5G01990.1 | Thale cress | golgi, plasma membrane, vacuole | 62.82 | 63.11 |
| EES07131 | Sorghum | golgi, plasma membrane | 36.72 | 35.18 |
| KXG36159 | Sorghum | plasma membrane | 25.87 | 26.99 |
| KXG35918 | Sorghum | plasma membrane | 25.17 | 26.33 |
| EER99100 | Sorghum | golgi, plasma membrane, vacuole | 24.94 | 26.09 |
| OQU93318 | Sorghum | plasma membrane | 25.17 | 26.01 |
| EER99101 | Sorghum | golgi, plasma membrane, vacuole | 24.71 | 25.85 |
| KXG34923 | Sorghum | plasma membrane | 23.56 | 23.56 |
Protein Annotations
| MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | EntrezGene:8055297 | UniProt:C5XN85 | EnsemblPlants:EES01656 | ProteinID:EES01656 |
| ProteinID:EES01656.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | ProteinID:OQU87758.1 | PFAM:PF03547 | PANTHER:PTHR31419 |
| PANTHER:PTHR31419:SF1 | EnsemblPlantsGene:SORBI_3003G336100 | unigene:Sbi.4911 | TMHMM:TMhelix | UniParc:UPI0001A8458C | RefSeq:XP_002456536.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:65937724..65942510
Molecular Weight (calculated)
46892.5 Da
IEP (calculated)
8.189
GRAVY (calculated)
0.640
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MMERSLLEVL ATAAQGGTEG TSVLSMLKYA VLPIAKVFTV CFMGFLMASK YVNILQPNGR KLLNGLVFSL LLPCLIFSQL GRAITIEKMI QWWYIPVNIV
101: VGAVSGSLIG FVVASIIRPP YPYFKFTIIH IGIGNIGNIP LVLIAALCRD PSNPFGDSDK CNQDGNAYIS FGQWVGAIIV YTYVFKMLAP PPGQTFDGSE
201: EDELPIKASG ENTVPQIGNY PMNTHTSTVP ENEPLLSAGD VQKERATSVG TKIMGFVKCV VKFLKDKQLL QPPIIASAFA IVIGVIPFLK NFVLTDDAPL
301: FFFTDSCLIL GEAMIPCILL AVGGNLVDGP GEGSKRLGVR TTVAIIFARL VLVPLAGVGI IILVDKLGFI PKDDKMFKFV LLLQHSMPTS VLSGAVANLR
401: GCGKESAAIL FWVHIFAVFS MAGWIIFYLS LLF
101: VGAVSGSLIG FVVASIIRPP YPYFKFTIIH IGIGNIGNIP LVLIAALCRD PSNPFGDSDK CNQDGNAYIS FGQWVGAIIV YTYVFKMLAP PPGQTFDGSE
201: EDELPIKASG ENTVPQIGNY PMNTHTSTVP ENEPLLSAGD VQKERATSVG TKIMGFVKCV VKFLKDKQLL QPPIIASAFA IVIGVIPFLK NFVLTDDAPL
301: FFFTDSCLIL GEAMIPCILL AVGGNLVDGP GEGSKRLGVR TTVAIIFARL VLVPLAGVGI IILVDKLGFI PKDDKMFKFV LLLQHSMPTS VLSGAVANLR
401: GCGKESAAIL FWVHIFAVFS MAGWIIFYLS LLF
001: MIARILAALA DSMEMPVAAG GGSVLGTIKI AVMPIAKVFT MCFLGLLMAS KYVNILPPSG RKLLNGLVFS LLLPCLIFSQ LGQAVTLQKM LQWWFIPVNV
101: VLGTISGSII GFIVASIVRP PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII LYTYVYQMFA PPPEGFDAEE
201: ENLALKTLPV DAAPEQVPLL TQNFPKDFSP TQDLLPVQST EPRGRGVSRK GKIAQIFVFL YEKLKLKQIV QPAIVASILA MILGAIPFTK KLIFTNGAPL
301: FFFTDSCMIL GDAMIPCILL ALGGNLINGP GSSKLGFKTT AAIIIGRLVL VPPVGLGIVT VADKLGFLPA DDKMFRFVLL LQHTMPTSVL SGAVANLRGC
401: GRESAAVLFW VHIFAIFSMA GWMVLYINIL F
101: VLGTISGSII GFIVASIVRP PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII LYTYVYQMFA PPPEGFDAEE
201: ENLALKTLPV DAAPEQVPLL TQNFPKDFSP TQDLLPVQST EPRGRGVSRK GKIAQIFVFL YEKLKLKQIV QPAIVASILA MILGAIPFTK KLIFTNGAPL
301: FFFTDSCMIL GDAMIPCILL ALGGNLINGP GSSKLGFKTT AAIIIGRLVL VPPVGLGIVT VADKLGFLPA DDKMFRFVLL LQHTMPTSVL SGAVANLRGC
401: GRESAAVLFW VHIFAIFSMA GWMVLYINIL F
Arabidopsis Description
PILS6Protein PIN-LIKES 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN2]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.