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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G421200.1 Wheat plasma membrane 63.05 66.1
TraesCS6D01G404400.1 Wheat plasma membrane 64.2 64.8
TraesCS6B01G466900.1 Wheat plasma membrane 65.36 64.32
HORVU6Hr1G094970.4 Barley golgi 63.51 63.51
GSMUA_Achr10P... Banana golgi, plasma membrane 52.89 55.58
KXG36159 Sorghum plasma membrane 52.42 54.7
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 50.81 54.46
GSMUA_Achr9P21210_001 Banana plasma membrane 51.96 53.44
GSMUA_Achr10P... Banana golgi, plasma membrane 50.81 53.14
Bra037268.1-P Field mustard golgi, plasma membrane 48.04 52.93
CDY30361 Canola golgi, plasma membrane 48.04 52.93
CDY57767 Canola plasma membrane 48.27 52.91
CDY26812 Canola plasma membrane 47.81 52.67
AT5G65980.1 Thale cress plasma membrane 48.04 52.66
CDY55102 Canola plasma membrane 48.04 52.66
Bra031803.1-P Field mustard plasma membrane 46.65 52.6
CDX81425 Canola plasma membrane 47.58 52.42
Bra002068.1-P Field mustard plasma membrane 47.34 52.16
CDY24342 Canola plasma membrane 47.34 52.16
CDY18579 Canola plasma membrane 47.11 51.78
PGSC0003DMT400048041 Potato plasma membrane 47.11 51.65
PGSC0003DMT400035511 Potato plasma membrane 47.81 51.11
Solyc02g082450.2.1 Tomato nucleus 47.58 50.86
AT2G17500.2 Thale cress plasma membrane 46.42 50.76
VIT_07s0031g02200.t01 Wine grape plasma membrane 48.96 50.36
Solyc03g032080.2.1 Tomato golgi, plasma membrane 28.18 50.21
CDY20805 Canola extracellular, plasma membrane 35.57 50.16
OQU93318 Sorghum plasma membrane 45.5 47.02
CDY57768 Canola extracellular, plasma membrane, vacuole 14.32 46.27
KRH28941 Soybean plasma membrane 43.65 45.11
KRH76521 Soybean plasma membrane 43.65 45.11
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 42.03 44.5
KRH56032 Soybean extracellular, golgi, plasma membrane 11.78 41.8
KXG35918 Sorghum plasma membrane 36.95 38.65
EER99100 Sorghum golgi, plasma membrane, vacuole 35.8 37.44
EER99101 Sorghum golgi, plasma membrane, vacuole 34.87 36.47
Bra037193.1-P Field mustard plasma membrane 46.88 33.28
EES07131 Sorghum golgi, plasma membrane 24.94 23.89
EES01656 Sorghum plasma membrane 23.56 23.56
Protein Annotations
EnsemblPlants:KXG34923EnsemblPlantsGene:SORBI_3002G108800GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3PFAM:PF03547
ProteinID:KXG34923ProteinID:KXG34923.1SEG:segTMHMM:TMhelixUniParc:UPI00081ADED4UniProt:A0A1B6QAG8
MapMan:11.2.4.2MapMan:24.2.5.2.2::::
Description
hypothetical protein
Coordinates
chr2:-:13186540..13189982
Molecular Weight (calculated)
46368.5 Da
IEP (calculated)
8.079
GRAVY (calculated)
0.542
Length
433 amino acids
Sequence
(BLAST)
001: MMAGGGGGFV SLLVVSSMPV AELLLIGVAG AYLATARCGN VLTPSARADI NRVVYAVFTP ALMLASLAST VTLKDVLAWW FMPVNIGIAF LAGGALGWVA
101: VLVLRPPPQL RGLVIASCSA ANFGNLMLVV IPAVCEEDGN PFGLPNSVCT EHGLSYASFS MALGGLYIWT HTHGIIKRSG EIYRKMREPI VGISAVTSVV
201: VEPNHDDDSV KSEEYNTISP SSKPADEKGQ HQILVPLLSG SSVFHHHQQG SGSKSLWQKI KQVTHQITEE LTSPPTTGAV MGLVIGTVPW LRSVFVGSNA
301: PLRAVQDSLK LLGDGTIPCL MLILGGNLTK GVRKTKVPLM VVVAVICVRY LILPLIGVLV VRAARDMGFL PPHPLYQYTL MMHFAVPPAM SIGTMSQLYD
401: VGQEECSVIL LWTYLVAALA LTVWSTIFMW ILQ
Best Arabidopsis Sequence Match ( AT5G65980.1 )
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Arabidopsis Description
PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.