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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:secretory
WoLF PSORT:extracellular
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002068.1-P Field mustard plasma membrane 97.72 76.34
CDY24342 Canola plasma membrane 97.07 75.83
CDY26812 Canola plasma membrane 92.83 72.52
CDY30361 Canola golgi, plasma membrane 92.51 72.26
AT2G17500.2 Thale cress plasma membrane 88.93 68.94
Solyc03g032080.2.1 Tomato golgi, plasma membrane 46.91 59.26
CDY18579 Canola plasma membrane 65.15 50.76
CDX81425 Canola plasma membrane 64.5 50.38
CDY45981 Canola golgi, plasma membrane, vacuole 24.76 49.35
CDY55102 Canola plasma membrane 63.19 49.11
CDY57767 Canola plasma membrane 63.19 49.11
PGSC0003DMT400035511 Potato plasma membrane 61.56 46.67
Solyc02g082450.2.1 Tomato nucleus 60.26 45.68
PGSC0003DMT400048041 Potato plasma membrane 58.63 45.57
KRH56032 Soybean extracellular, golgi, plasma membrane 17.92 45.08
Zm00001d007499_P001 Maize plasma membrane 22.8 43.48
VIT_07s0031g02200.t01 Wine grape plasma membrane 57.0 41.57
HORVU4Hr1G082680.2 Barley cytosol, endoplasmic reticulum, plasma membrane 31.27 41.2
TraesCS5B01G356700.1 Wheat plasma membrane 53.42 39.33
Zm00001d040149_P001 Maize plasma membrane 32.57 39.22
KRH28941 Soybean plasma membrane 53.42 39.14
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 51.47 39.11
TraesCS5D01G361500.1 Wheat plasma membrane 51.47 39.01
TraesCS5A01G354300.1 Wheat plasma membrane 52.44 38.7
KRH76521 Soybean plasma membrane 52.77 38.66
HORVU5Hr1G087880.13 Barley plasma membrane 53.42 38.41
KXG36159 Sorghum plasma membrane 51.79 38.31
TraesCS6A01G421200.1 Wheat plasma membrane 51.47 38.26
GSMUA_Achr10P... Banana golgi, plasma membrane 49.84 37.14
Os09t0555100-00 Rice plasma membrane 51.14 37.12
TraesCS6D01G404400.1 Wheat plasma membrane 51.47 36.83
GSMUA_Achr10P... Banana golgi, plasma membrane 49.51 36.72
Os09t0554300-01 Rice plasma membrane 50.81 36.45
GSMUA_Achr9P21210_001 Banana plasma membrane 49.84 36.34
TraesCS6B01G466900.1 Wheat plasma membrane 51.79 36.14
HORVU6Hr1G094970.4 Barley golgi 50.49 35.8
KXG34923 Sorghum plasma membrane 50.16 35.57
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 47.23 35.45
TraesCS4B01G322800.1 Wheat plasma membrane 46.91 34.95
GSMUA_Achr4P25890_001 Banana plasma membrane 47.88 34.59
TraesCS4D01G319200.1 Wheat plasma membrane 45.93 34.14
GSMUA_Achr5P15890_001 Banana golgi, plasma membrane 46.25 33.49
Zm00001d025364_P002 Maize plasma membrane 35.83 33.03
OQU93318 Sorghum plasma membrane 44.63 32.7
CDY29492 Canola plasma membrane 39.74 31.85
CDX87589 Canola golgi, plasma membrane, vacuole 40.07 31.62
CDY20402 Canola endoplasmic reticulum, plasma membrane, vacuole 39.74 31.52
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 52.44 31.02
Zm00001d007109_P001 Maize cytosol, golgi, plastid 30.29 30.1
CDX68094 Canola endoplasmic reticulum, plasma membrane, vacuole 37.13 29.38
Zm00001d021413_P002 Maize plasma membrane 42.67 29.11
CDX85953 Canola endoplasmic reticulum, plasma membrane, vacuole 33.22 27.95
TraesCS5A01G494900.1 Wheat golgi, peroxisome, plasma membrane, plastid 44.3 26.41
CDY31514 Canola mitochondrion, plasma membrane 39.74 25.52
CDY01222 Canola golgi, plasma membrane, plastid 26.38 19.24
CDY70057 Canola golgi, plasma membrane, plastid 26.38 19.15
CDY58937 Canola cytosol, golgi, plasma membrane 26.71 19.03
CDY03621 Canola cytosol, golgi, plasma membrane 26.06 18.56
CDX72776 Canola plasma membrane 25.08 16.92
CDX96302 Canola golgi, plasma membrane 24.76 16.56
CDY57768 Canola extracellular, plasma membrane, vacuole 5.54 12.69
Protein Annotations
EnsemblPlants:CDY20805EnsemblPlantsGene:GSBRNA2T00013056001GO:A0A078G2R9GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547ProteinID:CDY20805ProteinID:CDY20805.1TMHMM:TMhelixUniParc:UPI0004EE054BUniProt:A0A078G2R9
MapMan:11.2.4.2MapMan:24.2.5.2.2::::
Description
BnaC07g06540DBnaC07g06540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2R9]
Coordinates
chrLK032112:+:153658..159353
Molecular Weight (calculated)
33545.6 Da
IEP (calculated)
6.349
GRAVY (calculated)
0.496
Length
307 amino acids
Sequence
(BLAST)
001: MSNGVNHLLI LKPPPYLEGL IVATCSSGNM GNLPIILVPA ICDEDKSPFG NRSVCRTVGL SYASFSMALG GFYIWTYTFR LIKGSAMKFK DIEESEQKAI
101: RSSNSDLEAD HKSHLLGAPE ETLVKQETGF WRKGVDFLHE ILEELRAPPS VGAIIGFIFG AVTWLRNLII GDDAPLRIVQ TTAKLLGDGT IPCMTIILGG
201: NLIQGLRSSA VKPVVVLGIV CVRYILLPII GIGIVKSAES FGFLPADPLF QYVLMLQFTL PPAMNIGTMT QLYNVGQDEC SVLMLWTYLV AILALTVWST
301: IFLHLLV
Best Arabidopsis Sequence Match ( AT2G17500.1 )
(BLAST)
001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
Arabidopsis Description
PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.