Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025857.1-P | Field mustard | plasma membrane | 91.12 | 86.6 |
| CDY31514 | Canola | mitochondrion, plasma membrane | 98.17 | 78.66 |
| CDY45981 | Canola | golgi, plasma membrane, vacuole | 31.07 | 77.27 |
| CDY20402 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 73.37 | 72.61 |
| CDX87589 | Canola | golgi, plasma membrane, vacuole | 73.63 | 72.49 |
| AT1G20925.1 | Thale cress | plasma membrane | 86.16 | 69.92 |
| CDX68094 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 69.19 | 68.3 |
| CDX85953 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 65.01 | 68.22 |
| TraesCS5D01G275200.1 | Wheat | plasma membrane | 47.52 | 58.9 |
| PGSC0003DMT400025706 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 61.36 | 57.74 |
| Solyc04g082830.2.1 | Tomato | plasma membrane | 59.01 | 57.07 |
| KRH38085 | Soybean | extracellular | 7.31 | 54.9 |
| KRH07852 | Soybean | golgi, plasma membrane, vacuole | 16.45 | 54.78 |
| VIT_04s0044g01870.t01 | Wine grape | plasma membrane | 52.74 | 53.16 |
| VIT_04s0044g01890.t01 | Wine grape | endoplasmic reticulum, extracellular | 18.28 | 52.63 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 57.7 | 52.37 |
| KRH39386 | Soybean | golgi, plasma membrane, vacuole | 55.09 | 50.97 |
| KRH76489 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 54.57 | 50.36 |
| KRH28961 | Soybean | golgi, plasma membrane, vacuole | 54.31 | 50.12 |
| Solyc12g095750.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 54.57 | 49.88 |
| KRH34529 | Soybean | golgi, plasma membrane | 51.44 | 49.25 |
| HORVU5Hr1G073630.3 | Barley | golgi, plasma membrane, vacuole | 52.74 | 49.15 |
| EER99100 | Sorghum | golgi, plasma membrane, vacuole | 53.0 | 49.03 |
| KRH07859 | Soybean | golgi, plasma membrane, vacuole | 53.0 | 49.03 |
| Os09t0491740-01 | Rice | golgi, plasma membrane, vacuole | 48.04 | 48.55 |
| VIT_04s0044g01860.t01 | Wine grape | golgi, plasma membrane, vacuole | 52.74 | 48.33 |
| EER99101 | Sorghum | golgi, plasma membrane, vacuole | 52.22 | 48.31 |
| KXG35918 | Sorghum | plasma membrane | 52.22 | 48.31 |
| VIT_04s0044g01850.t01 | Wine grape | golgi, plasma membrane, vacuole | 52.48 | 48.09 |
| VIT_04s0044g01880.t01 | Wine grape | plastid | 54.57 | 45.53 |
| KRH66552 | Soybean | plasma membrane | 50.39 | 45.52 |
| KRG92281 | Soybean | plasma membrane | 48.3 | 45.23 |
| TraesCS5B01G267800.2 | Wheat | golgi, plasma membrane, vacuole | 43.86 | 44.56 |
| TraesCS5A01G267300.1 | Wheat | extracellular | 28.72 | 44.53 |
| PGSC0003DMT400075596 | Potato | plasma membrane | 23.5 | 43.9 |
| KRH48800 | Soybean | plasma membrane | 47.0 | 43.06 |
| CDY57767 | Canola | plasma membrane | 43.34 | 42.03 |
| CDY55102 | Canola | plasma membrane | 43.34 | 42.03 |
| CDX81425 | Canola | plasma membrane | 43.08 | 41.98 |
| CDY18579 | Canola | plasma membrane | 42.82 | 41.62 |
| CDY26812 | Canola | plasma membrane | 42.3 | 41.22 |
| CDY30361 | Canola | golgi, plasma membrane | 42.3 | 41.22 |
| CDY24342 | Canola | plasma membrane | 42.04 | 40.97 |
| KRG92282 | Soybean | plasma membrane | 27.42 | 40.54 |
| KRH48798 | Soybean | plasma membrane | 44.13 | 40.43 |
| CDY20805 | Canola | extracellular, plasma membrane | 31.85 | 39.74 |
| HORVU5Hr1G073670.1 | Barley | cytosol | 52.74 | 37.69 |
| KRG89678 | Soybean | plasma membrane | 19.58 | 37.5 |
| KRH07851 | Soybean | plasma membrane | 28.98 | 37.37 |
| KRH34530 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 30.29 | 37.06 |
| CDY57768 | Canola | extracellular, plasma membrane, vacuole | 12.27 | 35.07 |
| CDY01222 | Canola | golgi, plasma membrane, plastid | 31.59 | 28.74 |
| CDY70057 | Canola | golgi, plasma membrane, plastid | 31.33 | 28.37 |
| CDY58937 | Canola | cytosol, golgi, plasma membrane | 31.85 | 28.31 |
| CDY03621 | Canola | cytosol, golgi, plasma membrane | 31.85 | 28.31 |
| CDX96302 | Canola | golgi, plasma membrane | 32.64 | 27.23 |
| CDX72776 | Canola | plasma membrane | 31.85 | 26.81 |
| Zm00001d024842_P002 | Maize | plasma membrane | 18.28 | 22.65 |
Protein Annotations
| EnsemblPlants:CDY29492 | EnsemblPlantsGene:GSBRNA2T00043175001 | GO:A0A078GWH1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31651 | PANTHER:PTHR31651:SF6 |
| PFAM:PF03547 | ProteinID:CDY29492 | ProteinID:CDY29492.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE80CE |
| UniProt:A0A078GWH1 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | : | : | : |
Description
BnaA06g14780DBnaA06g14780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWH1]
Coordinates
chrLK032238:-:246577..249789
Molecular Weight (calculated)
41473.2 Da
IEP (calculated)
8.629
GRAVY (calculated)
0.807
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLDLFITS SIPVGKILVI TGIGFYLALD RVNILNQDAR KQLNNIVFYV FSPSLVASSL AETITYESLV KMWFMPLNVV LTFIIGSFLG WLVIKVTKPP
101: SHLRGIIVGC CAAGNLGNMP LIIIPAICNE KGSPFGDPET CEKYGLGYVA LSMAIGSICI WTYVYNLMRV LARETPIIIG TSSTVPLIPT KVVQVEEQFG
201: TWSKIKQRVC SAAENINLGT IFAPSTIAAL IALGVGLIPT LRKLLIGNTA PLRVIEDSVS LLGEGTIPLL TLIIGGNLLK GLRGSGMHKS VILGVVVVRY
301: VLLPIIGVLI VQGAHYLGLI TSEPLYQFVL LLQYVVPPAM NLGTITQLFG SGESECSVIL FWTYALASVS LTLWPTFFMW LVA
101: SHLRGIIVGC CAAGNLGNMP LIIIPAICNE KGSPFGDPET CEKYGLGYVA LSMAIGSICI WTYVYNLMRV LARETPIIIG TSSTVPLIPT KVVQVEEQFG
201: TWSKIKQRVC SAAENINLGT IFAPSTIAAL IALGVGLIPT LRKLLIGNTA PLRVIEDSVS LLGEGTIPLL TLIIGGNLLK GLRGSGMHKS VILGVVVVRY
301: VLLPIIGVLI VQGAHYLGLI TSEPLYQFVL LLQYVVPPAM NLGTITQLFG SGESECSVIL FWTYALASVS LTLWPTFFMW LVA
001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA
Arabidopsis Description
PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.