Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 5
- plasma membrane 7
- endoplasmic reticulum 6
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003716.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 100.0 | 100.0 |
| CDX85953 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 90.98 | 96.71 |
| CDY45981 | Canola | golgi, plasma membrane, vacuole | 35.57 | 89.61 |
| CDX87589 | Canola | golgi, plasma membrane, vacuole | 88.4 | 88.17 |
| CDY20402 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 86.86 | 87.08 |
| AT1G76520.2 | Thale cress | plasma membrane | 84.54 | 84.1 |
| AT1G76530.1 | Thale cress | plasma membrane | 78.61 | 73.49 |
| CDY29492 | Canola | plasma membrane | 68.3 | 69.19 |
| KRH38085 | Soybean | extracellular | 8.25 | 62.75 |
| CDY31514 | Canola | mitochondrion, plasma membrane | 68.04 | 55.23 |
| PGSC0003DMT400025706 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 56.96 | 54.3 |
| TraesCS5D01G275200.1 | Wheat | plasma membrane | 43.04 | 54.05 |
| Solyc04g082830.2.1 | Tomato | plasma membrane | 55.15 | 54.04 |
| VIT_04s0044g01890.t01 | Wine grape | endoplasmic reticulum, extracellular | 18.3 | 53.38 |
| KRH07852 | Soybean | golgi, plasma membrane, vacuole | 15.46 | 52.17 |
| VIT_04s0044g01870.t01 | Wine grape | plasma membrane | 50.77 | 51.84 |
| KRH76489 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 54.64 | 51.08 |
| KRH28961 | Soybean | golgi, plasma membrane, vacuole | 54.12 | 50.6 |
| KRH34529 | Soybean | golgi, plasma membrane | 51.29 | 49.75 |
| Solyc12g095750.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 53.09 | 49.16 |
| KRH39386 | Soybean | golgi, plasma membrane, vacuole | 51.8 | 48.55 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 52.32 | 48.1 |
| KRH07859 | Soybean | golgi, plasma membrane, vacuole | 51.29 | 48.07 |
| EER99101 | Sorghum | golgi, plasma membrane, vacuole | 50.77 | 47.58 |
| EER99100 | Sorghum | golgi, plasma membrane, vacuole | 50.52 | 47.34 |
| HORVU5Hr1G073630.3 | Barley | golgi, plasma membrane, vacuole | 50.0 | 47.2 |
| VIT_04s0044g01860.t01 | Wine grape | golgi, plasma membrane, vacuole | 50.26 | 46.65 |
| Os09t0491740-01 | Rice | golgi, plasma membrane, vacuole | 45.36 | 46.44 |
| KRG92281 | Soybean | plasma membrane | 47.94 | 45.48 |
| KXG35918 | Sorghum | plasma membrane | 48.45 | 45.41 |
| VIT_04s0044g01850.t01 | Wine grape | golgi, plasma membrane, vacuole | 48.71 | 45.22 |
| VIT_04s0044g01880.t01 | Wine grape | plastid | 52.58 | 44.44 |
| TraesCS5B01G267800.2 | Wheat | golgi, plasma membrane, vacuole | 42.53 | 43.77 |
| TraesCS5A01G267300.1 | Wheat | extracellular | 27.84 | 43.72 |
| KRH66552 | Soybean | plasma membrane | 47.42 | 43.4 |
| PGSC0003DMT400075596 | Potato | plasma membrane | 22.42 | 42.44 |
| KRG92282 | Soybean | plasma membrane | 28.09 | 42.08 |
| CDY57767 | Canola | plasma membrane | 40.98 | 40.25 |
| CDY55102 | Canola | plasma membrane | 40.98 | 40.25 |
| KRH48800 | Soybean | plasma membrane | 43.04 | 39.95 |
| CDX81425 | Canola | plasma membrane | 40.21 | 39.69 |
| CDY18579 | Canola | plasma membrane | 40.21 | 39.59 |
| CDY26812 | Canola | plasma membrane | 39.43 | 38.93 |
| CDY30361 | Canola | golgi, plasma membrane | 39.43 | 38.93 |
| KRH48798 | Soybean | plasma membrane | 41.75 | 38.76 |
| CDY24342 | Canola | plasma membrane | 38.92 | 38.42 |
| CDY20805 | Canola | extracellular, plasma membrane | 29.38 | 37.13 |
| KRH34530 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 29.9 | 37.06 |
| KRG89678 | Soybean | plasma membrane | 19.07 | 37.0 |
| KRH07851 | Soybean | plasma membrane | 27.84 | 36.36 |
| HORVU5Hr1G073670.1 | Barley | cytosol | 50.0 | 36.19 |
| CDY57768 | Canola | extracellular, plasma membrane, vacuole | 12.37 | 35.82 |
| CDY01222 | Canola | golgi, plasma membrane, plastid | 30.15 | 27.79 |
| CDY70057 | Canola | golgi, plasma membrane, plastid | 30.15 | 27.66 |
| CDY03621 | Canola | cytosol, golgi, plasma membrane | 29.9 | 26.91 |
| CDY58937 | Canola | cytosol, golgi, plasma membrane | 29.64 | 26.68 |
| CDX72776 | Canola | plasma membrane | 31.19 | 26.59 |
| CDX96302 | Canola | golgi, plasma membrane | 30.93 | 26.14 |
| Zm00001d024842_P002 | Maize | plasma membrane | 17.27 | 21.68 |
Protein Annotations
| MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | GO:A0A078BWC0 | EnsemblPlants:CDX68094 | ProteinID:CDX68094 | ProteinID:CDX68094.1 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| EnsemblPlantsGene:GSBRNA2T00099335001 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31651 | PANTHER:PTHR31651:SF6 | TMHMM:TMhelix |
| UniParc:UPI0002541558 | SEG:seg | : | : | : | : |
Description
BnaA07g21340D
Coordinates
chrLK031787:-:3839019..3841278
Molecular Weight (calculated)
42184.8 Da
IEP (calculated)
8.531
GRAVY (calculated)
0.635
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKLLHLFIT SSKPVVEILL ITSVGLYMAL DGVNLLGPDA RKYLNDIVFY VFNPSLVGSR LADSVTYDSL VKMWFMPINL LLTFIIGSLL GWIVILITKP
101: PSNLRGLIVG CCAAGNLGNM PLIIIPAVCK DKGGPFGDPE NCNKYGMGYV ALSMAMGSVY IWTYVYNIMR VLSNSVIETQ PSIESNCKVP LISSREEEED
201: NHKVGRWDRF KRRMVSLSEK VNLSTIFAPT TIAAIIALVI GLINPVRELI IGNVAPLGVL QDSVTLVGDG AIPATTLIIG GNLLKGMRSS GMKRSSIVGV
301: LVARYILLPI SGVLIVRGAY KLDLITSEPL YQFVLLIQYA VPPAMSLGTI TQLFGAGESE CSVIMLWAYG LASVSLTAWP TFFMWLVA
101: PSNLRGLIVG CCAAGNLGNM PLIIIPAVCK DKGGPFGDPE NCNKYGMGYV ALSMAMGSVY IWTYVYNIMR VLSNSVIETQ PSIESNCKVP LISSREEEED
201: NHKVGRWDRF KRRMVSLSEK VNLSTIFAPT TIAAIIALVI GLINPVRELI IGNVAPLGVL QDSVTLVGDG AIPATTLIIG GNLLKGMRSS GMKRSSIVGV
301: LVARYILLPI SGVLIVRGAY KLDLITSEPL YQFVLLIQYA VPPAMSLGTI TQLFGAGESE CSVIMLWAYG LASVSLTAWP TFFMWLVA
001: MVKLLELFIT SSKPVVEILL ITSVGFYMAL DGVNLLGHDA RKYLNNIVFY VFSPSLIGSR LADSVTYESL VKMWFMPVNV LLTFIIGSLL GWIVIVITKP
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA
101: PSHLRGLILG CCAAGNLGNM PLIIIPAVCK EKGGPFGDPE SCQKYGMGYV ALSMAMGSIY IWTYVYNLMR VLSNSPVETP PSVESNYDSY KVPLISSKEE
201: ENNQKAGRWE KVKRRLVSLS QKVNLKTIFA PSTIAAMIAL VIGLITPLRK LIIGTEAPLR VLQDSVTLVG DGAVPAMTMI IGGNLLKGLR SSGMKMSSII
301: GVLVARYVLL PMSGVLIVRG AYKLDLVTSE PLYQFVLLLQ YAVPPAMNLG TITQLFGTGE SECSVIMLWT YSLASIALTV WPTFFMWLVA
Arabidopsis Description
PILS3Protein PIN-LIKES 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.