Factsheet for TraesCS5D01G275200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	94.5	71.05
EER99100	Sorghum	golgi, plasma membrane, vacuole	82.52	61.59
EER99101	Sorghum	golgi, plasma membrane, vacuole	82.2	61.35
Zm00001d020953_P001	Maize	golgi, plasma membrane, vacuole	82.2	60.77
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	73.79	60.48
TraesCS5A01G267300.1	Wheat	extracellular	47.9	59.92
KXG35918	Sorghum	plasma membrane	78.96	58.94
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	68.61	55.94
KRH38085	Soybean	extracellular	9.06	54.9
HORVU5Hr1G073670.1	Barley	cytosol	94.5	54.48
CDY45981	Canola	golgi, plasma membrane, vacuole	26.54	53.25
GSMUA_Achr3P03690_001	Banana	plasma membrane	67.31	49.29
CDY29492	Canola	plasma membrane	58.9	47.52
KRH07852	Soybean	golgi, plasma membrane, vacuole	17.48	46.96
PGSC0003DMT400025706	Potato	endoplasmic reticulum, plasma membrane, vacuole	61.81	46.93
VIT_04s0044g01870.t01	Wine grape	plasma membrane	57.61	46.84
Solyc04g082830.2.1	Tomato	plasma membrane	58.25	45.45
AT1G76520.2	Thale cress	plasma membrane	57.28	45.38
KRH39386	Soybean	golgi, plasma membrane, vacuole	60.52	45.17
CDY20402	Canola	endoplasmic reticulum, plasma membrane, vacuole	55.99	44.7
Bra015736.1-P	Field mustard	golgi, plasma membrane, vacuole	55.99	44.47
CDX87589	Canola	golgi, plasma membrane, vacuole	55.99	44.47
Solyc12g095750.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	59.55	43.91
KRH76489	Soybean	endoplasmic reticulum, plasma membrane, vacuole	58.9	43.86
KRH07859	Soybean	golgi, plasma membrane, vacuole	58.25	43.48
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	55.99	43.47
KRH28961	Soybean	golgi, plasma membrane, vacuole	58.25	43.37
Solyc02g037550.2.1	Tomato	plasma membrane	55.34	43.18
Bra003716.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	54.05	43.04
CDX68094	Canola	endoplasmic reticulum, plasma membrane, vacuole	54.05	43.04
PGSC0003DMT400046054	Potato	plasma membrane	55.02	42.93
VIT_04s0044g01850.t01	Wine grape	golgi, plasma membrane, vacuole	56.96	42.11
VIT_04s0044g01890.t01	Wine grape	endoplasmic reticulum, extracellular	18.12	42.11
VIT_04s0044g01860.t01	Wine grape	golgi, plasma membrane, vacuole	55.99	41.39
CDX85953	Canola	endoplasmic reticulum, plasma membrane, vacuole	48.22	40.82
KRH34529	Soybean	golgi, plasma membrane	52.75	40.75
AT1G76530.1	Thale cress	plasma membrane	54.37	40.48
PGSC0003DMT400075596	Potato	plasma membrane	26.54	40.0
Bra025857.1-P	Field mustard	plasma membrane	52.1	39.95
VIT_04s0044g01880.t01	Wine grape	plastid	58.25	39.22
KRG92281	Soybean	plasma membrane	50.81	38.39
AT1G20925.1	Thale cress	plasma membrane	58.58	38.35
KRH66552	Soybean	plasma membrane	52.43	38.21
CDY31514	Canola	mitochondrion, plasma membrane	58.58	37.87
PGSC0003DMT400048072	Potato	plasma membrane	50.49	37.59
Solyc03g031990.2.1	Tomato	golgi, plasma membrane, vacuole	50.49	37.59
TraesCS5D01G361500.1	Wheat	plasma membrane	48.54	37.04
KRH48800	Soybean	plasma membrane	49.84	36.84
KRG92282	Soybean	plasma membrane	30.1	35.91
KRH48798	Soybean	plasma membrane	46.28	34.21
TraesCS4D01G319200.1	Wheat	plasma membrane	44.98	33.66
TraesCS6D01G404400.1	Wheat	plasma membrane	45.63	32.87
KRG89678	Soybean	plasma membrane	19.74	30.5
KRH07851	Soybean	plasma membrane	28.48	29.63
TraesCS5D01G361600.2	Wheat	mitochondrion, plasma membrane	48.87	29.09
KRH34530	Soybean	cytosol, endoplasmic reticulum, plasma membrane	26.54	26.2
TraesCS4D01G174100.2	Wheat	golgi, plasma membrane, vacuole	31.07	22.75
TraesCS3D01G335100.1	Wheat	plasma membrane	31.39	22.45
TraesCS3D01G530400.1	Wheat	plasma membrane	31.39	21.65

Protein Annotations

EnsemblPlants:TraesCS5D01G275200.1	EnsemblPlantsGene:TraesCS5D01G275200	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:

Description

No Description!

Coordinates

chr5D:-:378044750..378048944

Molecular Weight (calculated)

32964.6 Da

IEP (calculated)

8.776

GRAVY (calculated)

0.997

Length

309 amino acids

Sequence
(BLAST)

001: MGLLELFITA CMPVLNMLLV TGVGSFLATD SVGILGKEAR KHLNYVVFYV FNPALIATYL AKTITMESMA RLWFMPVNVF FTFIFGLIFG WIVIKVTGAP
101: LKLRGLILGC CSAGNLGNIF LIIIPALCKE KGSPFGAPDV CQTYGLAYSS LSLAIVGFII GGTPLIRNAL IGDDAPLRVL RESGELIGGA AVPSVTLIMG
201: GNLITGLRGT ASVPPSVIAG VVLVRFVLLP LVGTALVKAA VRYGVIRPDP LYQFVLLLQY AVPPAMNIGT ITQLFGVGES ECSVIFVWVY ALASVAVTMW
301: SAFFMWTLS

Best Arabidopsis Sequence Match ( AT1G76530.3 )
(BLAST)

001: MKLLELFIAS SKPVVETLLI TSVGFYLALD TVNLLGHDAR KHLNNIVFYV FSPSLIGSRL ADSVTYESLV KMWFMPVNVL LTFMIGSLLG WIVIVITKPP
101: SQLRGLIISC CASGNLGTMP LIIIPAICKE KGGPFGDSES CEKYGMGYVT LSMTAFFISV YKHDTNWYVS GGNGLLMDLY INLMRVLSNS PVETHTHSIE
201: SNYDDSCKVQ LISSKEEEKE EDNHQVGRWE EVKQRVVSLS KKVNLGSIFA PATIAAVCVS VAPFLYTFKT FTLVYIFLIS SSSVFSDYRA CDWAYYSFKE
301: PNNRHRSSFP CDSRLINPIG RWGHSCYDPD SWRKLT

Arabidopsis Description

PILS4Protein PIN-LIKES 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.