Factsheet for Zm00001d020953_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99100	Sorghum	golgi, plasma membrane, vacuole	86.12	86.96
EER99101	Sorghum	golgi, plasma membrane, vacuole	85.41	86.23
KXG35918	Sorghum	plasma membrane	84.45	85.27
TraesCS5D01G275200.1	Wheat	plasma membrane	60.77	82.2
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	75.84	77.13
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	66.51	73.35
TraesCS5A01G267300.1	Wheat	extracellular	41.63	70.45
TraesCS5B01G267800.2	Wheat	golgi, plasma membrane, vacuole	59.33	65.78
HORVU5Hr1G073670.1	Barley	cytosol	75.84	59.14
GSMUA_Achr3P03690_001	Banana	plasma membrane	56.94	56.4
Zm00001d040149_P001	Maize	plasma membrane	19.38	31.76
Zm00001d021413_P002	Maize	plasma membrane	32.54	30.22
Zm00001d007499_P001	Maize	plasma membrane	11.24	29.19
Zm00001d007109_P001	Maize	cytosol, golgi, plastid	20.33	27.51
Zm00001d025364_P002	Maize	plasma membrane	20.57	25.83
Zm00001d043083_P003	Maize	plasma membrane	25.36	24.48
Zm00001d051044_P001	Maize	golgi, plasma membrane, vacuole	25.36	23.5
Zm00001d024842_P002	Maize	plasma membrane	15.31	20.71

Protein Annotations

EnsemblPlants:Zm00001d020953_P001	EnsemblPlants:Zm00001d020953_T001	EnsemblPlantsGene:Zm00001d020953	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6
PFAM:PF03547	ProteinID:ONM55931.1	TMHMM:TMhelix	UniParc:UPI0004DEB8DC	UniProt:A0A1D6I789	MapMan:11.2.4.2
MapMan:24.2.5.2.2	:	:	:	:	:

Description

Protein PIN-LIKES 3

Coordinates

chr7:-:137599102..137608563

Molecular Weight (calculated)

44562.2 Da

IEP (calculated)

8.778

GRAVY (calculated)

0.644

Length

418 amino acids

Sequence
(BLAST)

001: MDLIQLFITA CVPVFNMLLV TGVGSFLATD FAGILSKEAR KHLNNVVFYV FNPSFVSIYL AKTITMESLA KLWFMPVNIL LAFTFGLFFG WIVVKVTRAP
101: AKLRGLILGC CSAGNLGNIF LIVIPALCKE KGSPFGAPDV CQDIGLAYFS LSMAIGAVFV WSIAYNIIRV TSKVEEGGGG HGNAQTNEPD VLSSGSGRGT
201: VAEEKNSSTS NDCAHECTLP LLSNRIPAAK NKEPKLGRAR KFLSSVCETV DLKKLFAPST IAVIVGFIIG GTPLIRNAII GDSAPLRVLQ ESTELIGGGA
301: IPSVTLIMGA NLLNGVRSGA RVPPSVIAGV VAVRYILLPL LGTALVKGAV RLGLIQPDPL YQFILHLQYA VPPAMNIGTI MQLFGVGESE CSVIFVWVYA
401: LASVAVTVWS AFFMWTLS

Best Arabidopsis Sequence Match ( AT1G20925.1 )
(BLAST)

001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA

Arabidopsis Description

PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.