Factsheet for TraesCS5B01G267800.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G267300.1	Wheat	extracellular	60.48	92.31
HORVU5Hr1G073630.3	Barley	golgi, plasma membrane, vacuole	82.23	75.43
TraesCS5D01G275200.1	Wheat	plasma membrane	60.48	73.79
EER99101	Sorghum	golgi, plasma membrane, vacuole	67.9	61.84
EER99100	Sorghum	golgi, plasma membrane, vacuole	66.31	60.39
Zm00001d020953_P001	Maize	golgi, plasma membrane, vacuole	65.78	59.33
KXG35918	Sorghum	plasma membrane	64.19	58.45
HORVU5Hr1G073670.1	Barley	cytosol	82.23	57.84
Os09t0491740-01	Rice	golgi, plasma membrane, vacuole	57.03	56.73
VIT_04s0044g01890.t01	Wine grape	endoplasmic reticulum, extracellular	18.57	52.63
KRH38085	Soybean	extracellular	6.9	50.98
GSMUA_Achr3P03690_001	Banana	plasma membrane	53.05	47.39
PGSC0003DMT400025706	Potato	endoplasmic reticulum, plasma membrane, vacuole	49.34	45.7
VIT_04s0044g01870.t01	Wine grape	plasma membrane	45.09	44.74
Solyc04g082830.2.1	Tomato	plasma membrane	46.68	44.44
AT1G76520.2	Thale cress	plasma membrane	45.62	44.1
CDY29492	Canola	plasma membrane	44.56	43.86
CDX87589	Canola	golgi, plasma membrane, vacuole	45.09	43.7
Bra015736.1-P	Field mustard	golgi, plasma membrane, vacuole	45.09	43.7
CDY20402	Canola	endoplasmic reticulum, plasma membrane, vacuole	44.83	43.67
KRH39386	Soybean	golgi, plasma membrane, vacuole	47.75	43.48
Solyc12g095750.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	48.01	43.2
CDX68094	Canola	endoplasmic reticulum, plasma membrane, vacuole	43.77	42.53
Bra003716.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	43.77	42.53
Bra008264.1-P	Field mustard	golgi, plasma membrane, vacuole	44.83	42.46
KRH07859	Soybean	golgi, plasma membrane, vacuole	46.42	42.27
Solyc02g037550.2.1	Tomato	plasma membrane	43.77	41.67
VIT_04s0044g01860.t01	Wine grape	golgi, plasma membrane, vacuole	45.89	41.39
PGSC0003DMT400046054	Potato	plasma membrane	43.24	41.16
KRH76489	Soybean	endoplasmic reticulum, plasma membrane, vacuole	44.83	40.72
KRH28961	Soybean	golgi, plasma membrane, vacuole	44.56	40.48
CDX85953	Canola	endoplasmic reticulum, plasma membrane, vacuole	38.46	39.73
VIT_04s0044g01850.t01	Wine grape	golgi, plasma membrane, vacuole	44.03	39.71
KRH34529	Soybean	golgi, plasma membrane	41.38	39.0
VIT_04s0044g01880.t01	Wine grape	plastid	47.21	38.78
AT1G76530.1	Thale cress	plasma membrane	42.44	38.55
KRG92281	Soybean	plasma membrane	41.38	38.14
CDY45981	Canola	golgi, plasma membrane, vacuole	15.12	37.01
Solyc03g031990.2.1	Tomato	golgi, plasma membrane, vacuole	40.58	36.87
Bra025857.1-P	Field mustard	plasma membrane	38.99	36.48
PGSC0003DMT400048072	Potato	plasma membrane	40.05	36.39
KRH66552	Soybean	plasma membrane	40.58	36.08
AT1G20925.1	Thale cress	plasma membrane	45.09	36.02
CDY31514	Canola	mitochondrion, plasma membrane	44.3	34.94
KRH48800	Soybean	plasma membrane	37.4	33.73
KRH48798	Soybean	plasma membrane	36.34	32.78
TraesCS5B01G356700.1	Wheat	plasma membrane	35.81	32.37
KRH07852	Soybean	golgi, plasma membrane, vacuole	9.81	32.17
KRH07851	Soybean	plasma membrane	24.67	31.31
KRG92282	Soybean	plasma membrane	20.69	30.12
TraesCS4B01G322800.1	Wheat	plasma membrane	32.1	29.37
PGSC0003DMT400075596	Potato	plasma membrane	15.38	28.29
TraesCS6B01G466900.1	Wheat	plasma membrane	32.63	27.95
KRG89678	Soybean	plasma membrane	14.06	26.5
KRH34530	Soybean	cytosol, endoplasmic reticulum, plasma membrane	19.89	23.96
TraesCS4B01G172100.1	Wheat	golgi, plasma membrane, vacuole	24.4	22.49
TraesCS3B01G373500.1	Wheat	plasma membrane	24.67	21.53
TraesCS3B01G592500.1	Wheat	plasma membrane	23.61	19.87

Protein Annotations

EnsemblPlants:TraesCS5B01G267800.2	EnsemblPlantsGene:TraesCS5B01G267800	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31651	PANTHER:PTHR31651:SF6	PFAM:PF03547
TMHMM:TMhelix	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:	:

Description

No Description!

Coordinates

chr5B:+:453877467..453881747

Molecular Weight (calculated)

40650.1 Da

IEP (calculated)

9.426

GRAVY (calculated)

0.401

Length

377 amino acids

Sequence
(BLAST)

001: MGLLELFITA CMPVLNMLLV TGVGSFLATD SAGILGKEAR KHLNYVVFYV FNPALIATYL GKTITMESLA KLWFMPVNVF FTFILGLIFG WIVIKVTGAP
101: LMLRGLILGC CSAGNLGNIF LIIIPALCKE KGSPFGAPDV CQTYGLAYSS LSLAIGAVFL WMGVYNIIRA NSNVTEGHGS SPIIQTKVLV SGGTGCADSE
201: DNHSISSGRV DECALPLISN KTKTKVPLLE RAKGFVSSVS GAVDLKKLFA PSTIGVRSSR SIRHVDHGRE PHHRDTRKGE RPAVSDRRRR GCQVCAAASG
301: GHRAGEGRGP LRVIRPDPLY QFVLLLQYAV PPAMNIGTIT QLFGVGESEC SVIFVWVYAL ASVAVTMWSA FFMWTLS

Best Arabidopsis Sequence Match ( AT1G20925.1 )
(BLAST)

001: MSLTQSAKLH IIHQSIGKIT TRLYDTSPFH GDSHCKQRRV KDNCIQFNMN ISNVLKCYSE IESFSINQRI RRSISLFLSI LRSFYSMRMR LLDLFITSSI
101: PVAKILLITG IGFYLALDQV NILNHDARKQ LNNIVFYVFS PSLVASSLSE TITYESMVKM WFMPLNVLLT FIIGSFLGWI VIKITKPPSH LRGIIVGCCA
201: AGNLGNMPLI IIPAICNEKG SPFGDPESCE KFGLGYIALS MAIGAIYIWT YVYNLMRMLA NPAGETAINS TSSTMPLISP KVEVAEQVGT WGKVKQRVCS
301: VAEKINLRTI FAPSTIAALI ALAVGLNPLL RKLLVGNTAP LRVIEDSVSL LGDGAIPVLT LIVGGNLLNG LRGSGINKSV IMGVVVVRYL LLPILGVFIV
401: RGAHYLGLVT SEPLYQFVLL LQYVVPPAMN LGTITQLFGS GESECSVILF WSYALASVSL TVWPTFFMWL VA

Arabidopsis Description

PILS1Protein PIN-LIKES 1 [Source:UniProtKB/Swiss-Prot;Acc:F4HWB6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.