Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36159 | Sorghum | plasma membrane | 78.02 | 76.14 |
| Os09t0554300-01 | Rice | plasma membrane | 80.25 | 75.93 |
| Os09t0555100-00 | Rice | plasma membrane | 74.32 | 71.16 |
| TraesCS5D01G361600.2 | Wheat | mitochondrion, plasma membrane | 88.15 | 68.79 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 63.46 | 62.38 |
| GSMUA_Achr2P03670_001 | Banana | golgi, plasma membrane, vacuole | 60.99 | 61.14 |
| Zm00001d021413_P002 | Maize | plasma membrane | 67.65 | 60.89 |
| Zm00001d007499_P001 | Maize | plasma membrane | 24.2 | 60.87 |
| GSMUA_Achr9P21210_001 | Banana | plasma membrane | 63.21 | 60.81 |
| CDY55102 | Canola | plasma membrane | 57.53 | 58.99 |
| CDY57767 | Canola | plasma membrane | 57.53 | 58.99 |
| AT5G65980.1 | Thale cress | plasma membrane | 57.53 | 58.99 |
| CDX81425 | Canola | plasma membrane | 56.79 | 58.52 |
| CDY18579 | Canola | plasma membrane | 56.79 | 58.38 |
| Bra031803.1-P | Field mustard | plasma membrane | 55.31 | 58.33 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 59.51 | 58.21 |
| PGSC0003DMT400048041 | Potato | plasma membrane | 54.07 | 55.44 |
| Zm00001d040149_P001 | Maize | plasma membrane | 34.81 | 55.29 |
| AT2G17500.2 | Thale cress | plasma membrane | 53.58 | 54.8 |
| CDY24342 | Canola | plasma membrane | 53.09 | 54.71 |
| Bra002068.1-P | Field mustard | plasma membrane | 53.09 | 54.71 |
| PGSC0003DMT400035511 | Potato | plasma membrane | 54.32 | 54.32 |
| TraesCS6D01G404400.1 | Wheat | plasma membrane | 57.28 | 54.08 |
| Bra037268.1-P | Field mustard | golgi, plasma membrane | 52.35 | 53.94 |
| CDY30361 | Canola | golgi, plasma membrane | 52.35 | 53.94 |
| Solyc02g082450.2.1 | Tomato | nucleus | 53.83 | 53.83 |
| CDY26812 | Canola | plasma membrane | 52.1 | 53.69 |
| VIT_07s0031g02200.t01 | Wine grape | plasma membrane | 55.8 | 53.68 |
| CDY57768 | Canola | extracellular, plasma membrane, vacuole | 17.53 | 52.99 |
| Zm00001d025364_P002 | Maize | plasma membrane | 42.96 | 52.25 |
| CDY20805 | Canola | extracellular, plasma membrane | 39.01 | 51.47 |
| Solyc03g032080.2.1 | Tomato | golgi, plasma membrane | 30.86 | 51.44 |
| KRH39407 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 51.85 | 51.34 |
| Zm00001d007109_P001 | Maize | cytosol, golgi, plastid | 37.04 | 48.54 |
| TraesCS5D01G275200.1 | Wheat | plasma membrane | 37.04 | 48.54 |
| TraesCS4D01G319200.1 | Wheat | plasma membrane | 49.38 | 48.43 |
| KRH28941 | Soybean | plasma membrane | 49.63 | 47.97 |
| KRH76521 | Soybean | plasma membrane | 49.63 | 47.97 |
| KRH56032 | Soybean | extracellular, golgi, plasma membrane | 13.33 | 44.26 |
| Bra037193.1-P | Field mustard | plasma membrane | 55.56 | 36.89 |
| TraesCS4D01G174100.2 | Wheat | golgi, plasma membrane, vacuole | 27.65 | 26.54 |
| TraesCS3D01G335100.1 | Wheat | plasma membrane | 28.15 | 26.39 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 28.64 | 25.89 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G361500.1 | EnsemblPlantsGene:TraesCS5D01G361500 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31651 | PANTHER:PTHR31651:SF3 | PFAM:PF03547 |
| TMHMM:TMhelix | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | : | : | : |
Description
No Description!
Coordinates
chr5D:-:440902673..440907551
Molecular Weight (calculated)
44014.5 Da
IEP (calculated)
6.498
GRAVY (calculated)
0.546
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFLSLLAVA SMPIVQVLLV GVIGAFLASG YSNVLTASAH RDMNKVVFTV FTPALMFASL AKTVTLSDVI SWWFMPVNIA ITFLVGSALS WIACKILKPP
101: PHFQDLITAF CSTGNLGNLL LIIVPAVCDE DGNPFGNDRS QCRSRGLPYS SLSMALGGLF IWTYTYSLMH KSGTLYHKMQ SKCVQRPADS DEEHLEGFNA
201: GDEERNEMNQ IEAPLLSGKS DIADNKGFCT NLAEALHQLV QELMTPPTIS AIIGFVVGLV PWLKSLIIGD GAPLRVIQDS LDLMGNGTIP CITLILGGNL
301: IQGLRKSVLK RAVIVAIVCI RYVAMPMMGI AVVRAAHGVG FLPHDPLYRY VLMLQFALPP AMNIGTMAQL FDVAQEECSV IYMWTYLVAT VALTTWSTVF
401: MSILS
101: PHFQDLITAF CSTGNLGNLL LIIVPAVCDE DGNPFGNDRS QCRSRGLPYS SLSMALGGLF IWTYTYSLMH KSGTLYHKMQ SKCVQRPADS DEEHLEGFNA
201: GDEERNEMNQ IEAPLLSGKS DIADNKGFCT NLAEALHQLV QELMTPPTIS AIIGFVVGLV PWLKSLIIGD GAPLRVIQDS LDLMGNGTIP CITLILGGNL
301: IQGLRKSVLK RAVIVAIVCI RYVAMPMMGI AVVRAAHGVG FLPHDPLYRY VLMLQFALPP AMNIGTMAQL FDVAQEECSV IYMWTYLVAT VALTTWSTVF
401: MSILS
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AETVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
101: PQLHGLIIAT CASGNMGNLM LILVPAICDE EGSPFGNRSV CRSIGLSYAS FSMALGGFYI WTYSYQLVRS SATQFRALEA AGLVKSPNKD IDSDPHALLL
201: KPHQNQDLEI QGKQKVSTRT YIKDLLHQIL EELFAPPTIG AILGFVFGAT NWLRNLIIGE NAPLRVIQDS VKLLGEGTIP CITLILGGNL IQGLRSSAVK
301: KSVIVGVIIV RYILLPVVGV GVVQLAGNLG YLPPDPLFRY VLMLQFALPP AMNISTMAQL FDVAQDECSV IFLWTYLVAS LALTVWSTIF LSILS
Arabidopsis Description
PILS7Protein PIN-LIKES 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKY4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.