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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55102 Canola plasma membrane 91.79 31.14
CDY57767 Canola plasma membrane 91.04 30.89
CDX81425 Canola plasma membrane 89.55 30.53
CDY18579 Canola plasma membrane 89.55 30.46
AT5G65980.1 Thale cress plasma membrane 89.55 30.38
PGSC0003DMT400048041 Potato plasma membrane 63.43 21.52
VIT_07s0031g02200.t01 Wine grape plasma membrane 66.42 21.14
CDY24342 Canola plasma membrane 61.19 20.87
PGSC0003DMT400035511 Potato plasma membrane 61.94 20.49
CDY30361 Canola golgi, plasma membrane 59.7 20.36
CDY26812 Canola plasma membrane 59.7 20.36
Solyc02g082450.2.1 Tomato nucleus 61.19 20.25
Bra037193.1-P Field mustard plasma membrane 89.55 19.67
KRH39407 Soybean endoplasmic reticulum, plasma membrane, vacuole 58.21 19.07
GSMUA_Achr9P21210_001 Banana plasma membrane 58.21 18.53
TraesCS5A01G354300.1 Wheat plasma membrane 57.46 18.51
KRH28941 Soybean plasma membrane 57.46 18.38
KRH76521 Soybean plasma membrane 57.46 18.38
GSMUA_Achr10P... Banana golgi, plasma membrane 56.72 18.36
TraesCS5B01G356700.1 Wheat plasma membrane 56.72 18.23
GSMUA_Achr10P... Banana golgi, plasma membrane 55.22 17.96
GSMUA_Achr2P03670_001 Banana golgi, plasma membrane, vacuole 52.99 17.57
HORVU5Hr1G087880.13 Barley plasma membrane 55.97 17.56
TraesCS5D01G361500.1 Wheat plasma membrane 52.99 17.53
Os09t0554300-01 Rice plasma membrane 55.22 17.29
Os09t0555100-00 Rice plasma membrane 53.73 17.02
GSMUA_Achr4P25890_001 Banana plasma membrane 53.73 16.94
KXG36159 Sorghum plasma membrane 51.49 16.63
GSMUA_Achr5P15890_001 Banana golgi, plasma membrane 52.24 16.51
TraesCS4B01G322800.1 Wheat plasma membrane 48.51 15.78
TraesCS4D01G319200.1 Wheat plasma membrane 48.51 15.74
TraesCS6A01G421200.1 Wheat plasma membrane 47.76 15.5
TraesCS5D01G361600.2 Wheat mitochondrion, plasma membrane 57.46 14.84
OQU93318 Sorghum plasma membrane 46.27 14.8
TraesCS6D01G404400.1 Wheat plasma membrane 47.01 14.69
TraesCS6B01G466900.1 Wheat plasma membrane 47.76 14.55
KXG34923 Sorghum plasma membrane 46.27 14.32
HORVU6Hr1G094970.4 Barley golgi 43.28 13.39
Zm00001d021413_P002 Maize plasma membrane 43.28 12.89
CDX87589 Canola golgi, plasma membrane, vacuole 36.57 12.6
TraesCS5A01G494900.1 Wheat golgi, peroxisome, plasma membrane, plastid 47.76 12.43
CDY20402 Canola endoplasmic reticulum, plasma membrane, vacuole 35.82 12.4
CDX68094 Canola endoplasmic reticulum, plasma membrane, vacuole 35.82 12.37
CDY29492 Canola plasma membrane 35.07 12.27
CDX85953 Canola endoplasmic reticulum, plasma membrane, vacuole 32.84 12.05
CDY31514 Canola mitochondrion, plasma membrane 35.07 9.83
CDY03621 Canola cytosol, golgi, plasma membrane 29.1 9.05
CDY58937 Canola cytosol, golgi, plasma membrane 29.1 9.05
CDY01222 Canola golgi, plasma membrane, plastid 28.36 9.03
CDY70057 Canola golgi, plasma membrane, plastid 28.36 8.98
CDX96302 Canola golgi, plasma membrane 29.1 8.5
CDX72776 Canola plasma membrane 28.36 8.35
CDY20805 Canola extracellular, plasma membrane 12.69 5.54
Zm00001d007109_P001 Maize cytosol, golgi, plastid 5.97 2.59
Zm00001d025364_P002 Maize plasma membrane 5.97 2.4
Solyc03g032080.2.1 Tomato golgi, plasma membrane 1.49 0.82
HORVU4Hr1G082680.2 Barley cytosol, endoplasmic reticulum, plasma membrane 0.75 0.43
KRH56032 Soybean extracellular, golgi, plasma membrane 0.0 0.0
Zm00001d007499_P001 Maize plasma membrane 0.0 0.0
CDY45981 Canola golgi, plasma membrane, vacuole 0.0 0.0
Zm00001d040149_P001 Maize plasma membrane 0.0 0.0
Protein Annotations
EnsemblPlants:CDY57768EnsemblPlantsGene:GSBRNA2T00022611001GO:A0A078J2K7GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:Mem_transPANTHER:PTHR31651PANTHER:PTHR31651:SF3
PFAM:PF03547ProteinID:CDY57768ProteinID:CDY57768.1TMHMM:TMhelixUniParc:UPI0004EE7456UniProt:A0A078J2K7
MapMan:11.2.4.2MapMan:24.2.5.2.2::::
Description
BnaC02g45090DBnaC02g45090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2K7]
Coordinates
chrLK033602:-:30561..31219
Molecular Weight (calculated)
14614.4 Da
IEP (calculated)
8.052
GRAVY (calculated)
0.887
Length
134 amino acids
Sequence
(BLAST)
001: MGFLELLEVA SMPIVQVLLI SVLGAFLATD YCSLLSADTR RSVNKLVFVV FTPCIMFANL AQTVTLQDII SWWFMPINVG ITFLVGGILG WLVVKLLNPK
101: PQLHGLIIAT CASGNISFAK SISKEILTKS NVNE
Best Arabidopsis Sequence Match ( AT2G17500.1 )
(BLAST)
001: MGFWSLLEVA SMPVIQVLFM SLVGAFMASD RCKLFPVEAR NSMNKVVFVL FAPALMFANL AQTVTLEDII SWWFMPVNMG LTFLIGGLLG WLVVKILKPP
101: PYLEGLIVAT CSAGNMGNLP IILVPAICDE DKSPFGNRSV CRTVGLSYAS FSMALGGFYI WTYTFRLIKG SAMKVQAIEE SEKIAIKSSN SDLEADHKTH
201: LLGAPEDKEN KVVKEKTGFW RKGVDFLHEI LEELLAPPTL GAIIGFIFGA VRWLRNLIIG DDAPLRIVQS TAKLLGDGTI PCMTIILGGN LIQGLRSSAV
301: KPMVVLGIVC VRYIAMPIIG IGIVLTAANL GFLPADPLFQ YVLMLQFTLP PAMNIGTMTQ LYNVAQDECS VLMLWTYLVA ILALTVWSTI FLHLLV
Arabidopsis Description
PILS5Protein PIN-LIKES 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHL8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.