Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P09660_001 | Banana | golgi, plasma membrane | 82.21 | 90.0 |
| VIT_08s0056g00310.t01 | Wine grape | cytosol, golgi, plasma membrane | 70.19 | 72.1 |
| TraesCS4B01G172100.1 | Wheat | golgi, plasma membrane, vacuole | 68.51 | 69.68 |
| TraesCS3A01G341400.1 | Wheat | plasma membrane | 71.88 | 69.21 |
| TraesCS3B01G373500.1 | Wheat | plasma membrane | 71.88 | 69.21 |
| EES01656 | Sorghum | plasma membrane | 71.88 | 69.05 |
| Os01t0818000-01 | Rice | plasma membrane | 71.63 | 68.98 |
| TraesCS3D01G335100.1 | Wheat | plasma membrane | 71.63 | 68.98 |
| PGSC0003DMT400071229 | Potato | cytosol, golgi, plasma membrane | 69.95 | 68.63 |
| HORVU3Hr1G080640.5 | Barley | plasma membrane | 71.15 | 68.52 |
| Solyc10g074790.1.1 | Tomato | plasma membrane | 69.47 | 68.16 |
| Zm00001d043083_P003 | Maize | plasma membrane | 70.91 | 68.13 |
| TraesCS4A01G132600.1 | Wheat | golgi, plasma membrane, vacuole | 65.62 | 67.74 |
| KRH40632 | Soybean | plasma membrane | 67.31 | 67.63 |
| KRH00524 | Soybean | plasma membrane | 66.83 | 67.15 |
| TraesCS4D01G174100.2 | Wheat | golgi, plasma membrane, vacuole | 67.79 | 66.82 |
| Os05t0481900-01 | Rice | golgi, plasma membrane, plastid | 69.95 | 66.59 |
| CDY03621 | Canola | cytosol, golgi, plasma membrane | 68.99 | 66.59 |
| CDY01222 | Canola | golgi, plasma membrane, plastid | 67.31 | 66.51 |
| Bra030441.1-P | Field mustard | golgi, plasma membrane, plastid | 67.55 | 66.43 |
| CDY70057 | Canola | golgi, plasma membrane, plastid | 67.31 | 66.19 |
| Bra014265.1-P | Field mustard | plasma membrane | 68.51 | 66.13 |
| CDY58937 | Canola | cytosol, golgi, plasma membrane | 68.51 | 66.13 |
| AT5G01990.1 | Thale cress | golgi, plasma membrane, vacuole | 67.79 | 65.43 |
| HORVU4Hr1G050910.5 | Barley | golgi, plasma membrane, plastid | 68.99 | 60.29 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 37.74 | 40.05 |
| GSMUA_Achr11P... | Banana | plasma membrane | 37.26 | 34.99 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 29.09 | 29.37 |
| GSMUA_Achr9P21210_001 | Banana | plasma membrane | 28.85 | 28.5 |
| GSMUA_Achr2P03670_001 | Banana | golgi, plasma membrane, vacuole | 27.16 | 27.97 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane | 27.4 | 27.54 |
| GSMUA_Achr4P25890_001 | Banana | plasma membrane | 27.88 | 27.29 |
| GSMUA_Achr3P03690_001 | Banana | plasma membrane | 27.4 | 27.01 |
| GSMUA_Achr5P15890_001 | Banana | golgi, plasma membrane | 27.4 | 26.89 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P16830_001 | EnsemblPlants:GSMUA_Achr9T16830_001 | EnsemblPlantsGene:GSMUA_Achr9G16830_001 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31419 | PANTHER:PTHR31419:SF1 |
| PFAM:PF03547 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295CFBF | UniProt:M0U0Z0 | MapMan:11.2.4.2 |
| MapMan:24.2.5.2.2 | : | : | : | : | : |
Description
auxin efflux carrier component, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G16830_001]
Coordinates
chr9:-:11425340..11444240
Molecular Weight (calculated)
45243.6 Da
IEP (calculated)
8.557
GRAVY (calculated)
0.662
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MERSLLAVVT DGQSGSSESV FALMKFAVLP IAKVFTMCFM GFLMASKYVN ILPANGRKLL NGLVFSLLLP CLIFSQLGRA ITLQKLLEWW FIPVNIILAT
101: ISGSLVGLVV ASIVRPPRPY FKFTIINIGI GNIGNIPLVL IAALCRDKSN PFGDSDKCSQ DGNAYISFGQ WVGAIVLYTY VFQMLAPPPG ETFDGADEEK
201: LPTKVPVNDS VSDQVPLLTS KEPEITGHES SRQGRLIEHL CYLVEKLKIK QVFQPPIIAS VLAIVIGIVP FLKHLILTDD APFFFFTDSC LILGEAMIPC
301: ILLALGGNLV DGPGAGSRRL GLRTTVAIIF GRLVLVPPAG LAIVTVADKL GLFPRDDKMF KFILLLQHTM PTSVLSGAVA SLRGCGKEAA SVLFWVHIFA
401: VFSMAGWIVL YLRLLF
101: ISGSLVGLVV ASIVRPPRPY FKFTIINIGI GNIGNIPLVL IAALCRDKSN PFGDSDKCSQ DGNAYISFGQ WVGAIVLYTY VFQMLAPPPG ETFDGADEEK
201: LPTKVPVNDS VSDQVPLLTS KEPEITGHES SRQGRLIEHL CYLVEKLKIK QVFQPPIIAS VLAIVIGIVP FLKHLILTDD APFFFFTDSC LILGEAMIPC
301: ILLALGGNLV DGPGAGSRRL GLRTTVAIIF GRLVLVPPAG LAIVTVADKL GLFPRDDKMF KFILLLQHTM PTSVLSGAVA SLRGCGKEAA SVLFWVHIFA
401: VFSMAGWIVL YLRLLF
001: MIARILAALA DSMEMPVAAG GGSVLGTIKI AVMPIAKVFT MCFLGLLMAS KYVNILPPSG RKLLNGLVFS LLLPCLIFSQ LGQAVTLQKM LQWWFIPVNV
101: VLGTISGSII GFIVASIVRP PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII LYTYVYQMFA PPPEGFDAEE
201: ENLALKTLPV DAAPEQVPLL TQNFPKDFSP TQDLLPVQST EPRGRGVSRK GKIAQIFVFL YEKLKLKQIV QPAIVASILA MILGAIPFTK KLIFTNGAPL
301: FFFTDSCMIL GDAMIPCILL ALGGNLINGP GSSKLGFKTT AAIIIGRLVL VPPVGLGIVT VADKLGFLPA DDKMFRFVLL LQHTMPTSVL SGAVANLRGC
401: GRESAAVLFW VHIFAIFSMA GWMVLYINIL F
101: VLGTISGSII GFIVASIVRP PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII LYTYVYQMFA PPPEGFDAEE
201: ENLALKTLPV DAAPEQVPLL TQNFPKDFSP TQDLLPVQST EPRGRGVSRK GKIAQIFVFL YEKLKLKQIV QPAIVASILA MILGAIPFTK KLIFTNGAPL
301: FFFTDSCMIL GDAMIPCILL ALGGNLINGP GSSKLGFKTT AAIIIGRLVL VPPVGLGIVT VADKLGFLPA DDKMFRFVLL LQHTMPTSVL SGAVANLRGC
401: GRESAAVLFW VHIFAIFSMA GWMVLYINIL F
Arabidopsis Description
PILS6Protein PIN-LIKES 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN2]
SUBAcon: [plasma membrane,golgi,vacuole]
SUBAcon: [plasma membrane,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.