Factsheet for TraesCS3A01G341400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G335100.1	Wheat	plasma membrane	99.54	99.54
TraesCS3B01G373500.1	Wheat	plasma membrane	99.31	99.31
HORVU3Hr1G080640.5	Barley	plasma membrane	98.38	98.38
Os01t0818000-01	Rice	plasma membrane	87.27	87.27
EES01656	Sorghum	plasma membrane	86.57	86.37
Zm00001d043083_P003	Maize	plasma membrane	85.88	85.68
GSMUA_Achr3P09660_001	Banana	golgi, plasma membrane	64.12	72.89
GSMUA_Achr9P16830_001	Banana	plasma membrane	69.21	71.88
VIT_08s0056g00310.t01	Wine grape	cytosol, golgi, plasma membrane	64.12	68.4
Solyc10g074790.1.1	Tomato	plasma membrane	65.97	67.22
TraesCS4A01G132600.1	Wheat	golgi, plasma membrane, vacuole	62.5	67.0
KRH40632	Soybean	plasma membrane	63.66	66.43
KRH00524	Soybean	plasma membrane	63.43	66.18
PGSC0003DMT400071229	Potato	cytosol, golgi, plasma membrane	64.81	66.04
CDY01222	Canola	golgi, plasma membrane, plastid	63.19	64.85
Bra030441.1-P	Field mustard	golgi, plasma membrane, plastid	62.96	64.3
CDY70057	Canola	golgi, plasma membrane, plastid	62.73	64.07
CDY03621	Canola	cytosol, golgi, plasma membrane	63.66	63.81
CDY58937	Canola	cytosol, golgi, plasma membrane	63.43	63.57
Bra014265.1-P	Field mustard	plasma membrane	63.43	63.57
AT5G01990.1	Thale cress	golgi, plasma membrane, vacuole	62.5	62.65
TraesCS3A01G525200.1	Wheat	plasma membrane	38.19	36.83
TraesCS5A01G354300.1	Wheat	plasma membrane	26.39	27.4
TraesCS6A01G421200.1	Wheat	plasma membrane	24.31	25.42
TraesCS5A01G267300.1	Wheat	extracellular	13.43	23.48
TraesCS5A01G494900.1	Wheat	golgi, peroxisome, plasma membrane, plastid	23.38	19.61

Protein Annotations

EnsemblPlants:TraesCS3A01G341400.1	EnsemblPlantsGene:TraesCS3A01G341400	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31419	PANTHER:PTHR31419:SF1	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	MapMan:11.2.4.2	MapMan:24.2.5.2.2	:	:

Description

No Description!

Coordinates

chr3A:+:588824037..588827326

Molecular Weight (calculated)

46657.2 Da

IEP (calculated)

7.652

GRAVY (calculated)

0.643

Length

432 amino acids

Sequence
(BLAST)

001: MMERRSLMEA LVTAAQGGST DTSVLSMLKY AVLPIAKVFT VCFMGFLMAT KYVNILQPNG RKLLNGLVFS LLLPCLIFSQ LGSAITLEKL VQWWYIPVNI
101: VVGAVSGSLI GFVVASIIRP PYPYFKFTVI HIGIGNIGNI PLVLIAALCR DPSNPFGDSE KCSQDGNAYI SFGQWVGAII VYTYVFKMLS PPPGETFDGE
201: EEKLPVLASE ENAMPELGKY PTGTHTSTVP EDEPLLALEG NQKGSTSLGS KILSCARCVV KFLKDKQLLQ PPIIASVFAI GIGVVPFLKG LIFTDDAPLF
301: FFTDSCLILG EAMIPCILLA VGGNLVDGPG EGSKRLGVRT TVAIIFARLI LVPIAGVGIV MLVDKLGFIP KDDKMFKFVL LLQHSMPTSV LSGAVANLRG
401: CGKESAAILF WVHIFAVFSM AGWIIFYLTL LF

Best Arabidopsis Sequence Match ( AT5G01990.1 )
(BLAST)

001: MIARILAALA DSMEMPVAAG GGSVLGTIKI AVMPIAKVFT MCFLGLLMAS KYVNILPPSG RKLLNGLVFS LLLPCLIFSQ LGQAVTLQKM LQWWFIPVNV
101: VLGTISGSII GFIVASIVRP PYPYFKFTII QIGVGNIGNV PLVLLAALCR DTSNPFGDSE KCSIDGTAYI SFGQWVGAII LYTYVYQMFA PPPEGFDAEE
201: ENLALKTLPV DAAPEQVPLL TQNFPKDFSP TQDLLPVQST EPRGRGVSRK GKIAQIFVFL YEKLKLKQIV QPAIVASILA MILGAIPFTK KLIFTNGAPL
301: FFFTDSCMIL GDAMIPCILL ALGGNLINGP GSSKLGFKTT AAIIIGRLVL VPPVGLGIVT VADKLGFLPA DDKMFRFVLL LQHTMPTSVL SGAVANLRGC
401: GRESAAVLFW VHIFAIFSMA GWMVLYINIL F

Arabidopsis Description

PILS6Protein PIN-LIKES 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZN2]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.