Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051044_P001 | Maize | golgi, plasma membrane, vacuole | 87.47 | 88.25 |
| EES07131 | Sorghum | golgi, plasma membrane | 87.47 | 88.05 |
| TraesCS3B01G592500.1 | Wheat | plasma membrane | 85.27 | 86.61 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 85.27 | 86.61 |
| TraesCS3A01G525200.1 | Wheat | plasma membrane | 84.62 | 85.94 |
| HORVU3Hr1G114270.1 | Barley | plasma membrane | 84.18 | 84.55 |
| HORVU0Hr1G031980.1 | Barley | golgi, plasma membrane | 84.4 | 83.12 |
| GSMUA_Achr11P... | Banana | plasma membrane | 76.92 | 79.01 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 67.91 | 78.83 |
| VIT_01s0011g04640.t01 | Wine grape | plasma membrane | 68.35 | 71.33 |
| KRH38174 | Soybean | plasma membrane | 65.93 | 68.18 |
| KRG94282 | Soybean | plasma membrane | 65.49 | 66.97 |
| VIT_14s0006g01970.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 69.45 | 65.83 |
| VIT_18s0001g00940.t01 | Wine grape | plasma membrane | 53.85 | 65.33 |
| PGSC0003DMT400078752 | Potato | plasma membrane | 64.62 | 65.04 |
| CDX72776 | Canola | plasma membrane | 64.84 | 64.84 |
| Solyc02g091240.1.1 | Tomato | golgi, plasma membrane | 64.18 | 64.6 |
| AT1G71090.1 | Thale cress | plasma membrane | 64.18 | 63.9 |
| Bra016159.1-P | Field mustard | golgi, plasma membrane | 64.4 | 63.83 |
| CDX96302 | Canola | golgi, plasma membrane | 64.4 | 63.83 |
| VIT_18s0001g00260.t01 | Wine grape | plasma membrane | 41.1 | 60.71 |
| Os01t0818000-01 | Rice | plasma membrane | 34.51 | 36.34 |
| Os05t0481900-01 | Rice | golgi, plasma membrane, plastid | 34.51 | 35.93 |
| Os09t0555100-00 | Rice | plasma membrane | 25.49 | 27.42 |
| Os09t0554300-01 | Rice | plasma membrane | 25.05 | 26.64 |
| Os09t0491740-01 | Rice | golgi, plasma membrane, vacuole | 21.54 | 25.86 |
Protein Annotations
| MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | EntrezGene:4344852 | ProteinID:BAD05750.1 | ProteinID:BAF23083.1 | ProteinID:BAT04168.1 |
| ProteinID:EAZ41770.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009791 |
| GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010311 | GO:GO:0010315 | GO:GO:0010329 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0040007 | GO:GO:0040009 | GO:GO:0055085 | InterPro:Mem_trans | EnsemblPlantsGene:Os08g0191000 |
| EnsemblPlants:Os08t0191000-01 | PFAM:PF03547 | PANTHER:PTHR31419 | PANTHER:PTHR31419:SF2 | UniProt:Q6YZX7 | TMHMM:TMhelix |
| UniParc:UPI000022F304 | RefSeq:XP_015650852.1 | SEG:seg | : | : | : |
Description
PIN likes 2Auxin efflux carrier domain containing protein. (Os08t0191000-01)
Coordinates
chr8:+:5322769..5325114
Molecular Weight (calculated)
50007.2 Da
IEP (calculated)
6.934
GRAVY (calculated)
0.624
Length
455 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWLSANLQV NPQVTVHGDW VSAVMPLMKL LCLTVIGLVL SNPRTQIIPK ATFKLLSKLV FALFLPCLIF VHLGQSVTIQ NILDWWFIPV NVLISTAIGC
101: ILGYIVALIC RPPPQFFRFT VIMTGFGNTG NLPIAIIGSV CHTTDHPFGP GCHRKGVAYV SFAQWVAVIL VYTLVYHMME PPMQFYEIVG EGNEIVEEPA
201: QISNYSRSLL HEAEWPGMAD KETEHSKTPF IARVFMSISG SSQNTFPDID FAEEGTSGAG PSSPKSLRCL AEPKVVRRIR VVAEKTPIQH VLQPPTIASL
301: LAIVIGMVPL FKDFVFVPDA PLSFFTDSLE ILAQAVVPSV MLILGGMLAE GPKDNALGIR TITGIIVARL LILPCIGIGV VLLADRLHLL VEEDHMYRFV
401: LSLQYSTPSA ILLGAIASLR GYAVKEASAL LFWQHICAVL SLSIYLIVYF RLLTI
101: ILGYIVALIC RPPPQFFRFT VIMTGFGNTG NLPIAIIGSV CHTTDHPFGP GCHRKGVAYV SFAQWVAVIL VYTLVYHMME PPMQFYEIVG EGNEIVEEPA
201: QISNYSRSLL HEAEWPGMAD KETEHSKTPF IARVFMSISG SSQNTFPDID FAEEGTSGAG PSSPKSLRCL AEPKVVRRIR VVAEKTPIQH VLQPPTIASL
301: LAIVIGMVPL FKDFVFVPDA PLSFFTDSLE ILAQAVVPSV MLILGGMLAE GPKDNALGIR TITGIIVARL LILPCIGIGV VLLADRLHLL VEEDHMYRFV
401: LSLQYSTPSA ILLGAIASLR GYAVKEASAL LFWQHICAVL SLSIYLIVYF RLLTI
001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
Arabidopsis Description
PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.