Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU0Hr1G031980.1 | Barley | golgi, plasma membrane | 100.0 | 98.05 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 95.58 | 96.65 |
| TraesCS3B01G592500.1 | Wheat | plasma membrane | 95.14 | 96.21 |
| TraesCS3A01G525200.1 | Wheat | plasma membrane | 94.92 | 95.98 |
| EES07131 | Sorghum | golgi, plasma membrane | 86.09 | 86.28 |
| Zm00001d051044_P001 | Maize | golgi, plasma membrane, vacuole | 85.87 | 86.25 |
| Os08t0191000-01 | Rice | golgi, plasma membrane, plastid | 84.55 | 84.18 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 70.2 | 81.12 |
| GSMUA_Achr11P... | Banana | plasma membrane | 78.37 | 80.14 |
| VIT_01s0011g04640.t01 | Wine grape | plasma membrane | 69.09 | 71.79 |
| KRH38174 | Soybean | plasma membrane | 68.21 | 70.23 |
| KRG94282 | Soybean | plasma membrane | 67.99 | 69.21 |
| VIT_14s0006g01970.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 70.42 | 66.46 |
| VIT_18s0001g00940.t01 | Wine grape | plasma membrane | 54.3 | 65.6 |
| PGSC0003DMT400078752 | Potato | plasma membrane | 65.12 | 65.27 |
| AT1G71090.1 | Thale cress | plasma membrane | 65.78 | 65.21 |
| Solyc02g091240.1.1 | Tomato | golgi, plasma membrane | 64.9 | 65.04 |
| CDX72776 | Canola | plasma membrane | 64.68 | 64.4 |
| Bra016159.1-P | Field mustard | golgi, plasma membrane | 64.9 | 64.05 |
| CDX96302 | Canola | golgi, plasma membrane | 64.9 | 64.05 |
| VIT_18s0001g00260.t01 | Wine grape | plasma membrane | 40.62 | 59.74 |
| HORVU3Hr1G080640.5 | Barley | plasma membrane | 36.42 | 38.19 |
| HORVU4Hr1G050910.5 | Barley | golgi, plasma membrane, plastid | 34.66 | 32.98 |
| HORVU5Hr1G087880.13 | Barley | plasma membrane | 26.05 | 27.63 |
| HORVU5Hr1G073630.3 | Barley | golgi, plasma membrane, vacuole | 24.5 | 27.01 |
| HORVU6Hr1G094970.4 | Barley | golgi | 24.72 | 25.87 |
| HORVU4Hr1G082680.2 | Barley | cytosol, endoplasmic reticulum, plasma membrane | 11.92 | 23.18 |
| HORVU5Hr1G073670.1 | Barley | cytosol | 24.5 | 20.71 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G114270.1 | EnsemblPlantsGene:HORVU3Hr1G114270 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31419 | PANTHER:PTHR31419:SF2 | PFAM:PF03547 |
| TMHMM:TMhelix | UniParc:UPI00029611E6 | UniProt:M0W1Z1 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 | : |
Description
No Description!
Coordinates
chrchr3H:+:690563628..690565747
Molecular Weight (calculated)
49446.5 Da
IEP (calculated)
7.281
GRAVY (calculated)
0.618
Length
453 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPQVAVRGG DWVSAVTPLL KLLCLTVIGL LLAHPRAQVV PKATFKLLSK LVFALFLPCL IFVHLGQSVT LHNVLHWWFI PVNVLIATAV GCALGYAVAL
101: VCRPPPRFFR FTVIMTGFGN TGNLPIAIIG SVCHTTDHPF GPGCHREGIA YVSFAQWVAV LLVYTLVYHM MEPPMQYYEI VGEGNEIERV PEEEETQVSN
201: FSRPLLQEAE WPGMAEKVME HSKTPFIARI FASISGSSQN TFPDIDFSEE GGISGAGPSS PKSLRCLAEP KVVRRMRVVA EKTPIQHVLQ PPTIASLLAI
301: IIGMVPVLKA FVFGADAPLS FFTDSLEILA AAVVPSVMLI LGGMLAEGPN DNALGKRTII GIIVARLLIL PCIGIGIVIL ADKLNLLVEN DYMYRFVLSL
401: QYSTPSAILL GAIASLRGYS VKEASALLFW QHICAVFSLS IYLVVYFKLL SYI
101: VCRPPPRFFR FTVIMTGFGN TGNLPIAIIG SVCHTTDHPF GPGCHREGIA YVSFAQWVAV LLVYTLVYHM MEPPMQYYEI VGEGNEIERV PEEEETQVSN
201: FSRPLLQEAE WPGMAEKVME HSKTPFIARI FASISGSSQN TFPDIDFSEE GGISGAGPSS PKSLRCLAEP KVVRRMRVVA EKTPIQHVLQ PPTIASLLAI
301: IIGMVPVLKA FVFGADAPLS FFTDSLEILA AAVVPSVMLI LGGMLAEGPN DNALGKRTII GIIVARLLIL PCIGIGIVIL ADKLNLLVEN DYMYRFVLSL
401: QYSTPSAILL GAIASLRGYS VKEASALLFW QHICAVFSLS IYLVVYFKLL SYI
001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
Arabidopsis Description
PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.