Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 3
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078752 | Potato | plasma membrane | 95.35 | 95.35 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 60.84 | 70.15 |
| GSMUA_Achr11P... | Banana | plasma membrane | 68.14 | 69.53 |
| TraesCS3D01G530400.1 | Wheat | plasma membrane | 65.93 | 66.52 |
| TraesCS3B01G592500.1 | Wheat | plasma membrane | 65.71 | 66.29 |
| VIT_14s0006g01970.t01 | Wine grape | golgi, mitochondrion, plasma membrane, plastid | 70.35 | 66.25 |
| TraesCS3A01G525200.1 | Wheat | plasma membrane | 65.49 | 66.07 |
| Zm00001d051044_P001 | Maize | golgi, plasma membrane, vacuole | 64.82 | 64.97 |
| HORVU3Hr1G114270.1 | Barley | plasma membrane | 65.04 | 64.9 |
| EES07131 | Sorghum | golgi, plasma membrane | 64.82 | 64.82 |
| VIT_18s0001g00940.t01 | Wine grape | plasma membrane | 53.76 | 64.8 |
| Os08t0191000-01 | Rice | golgi, plasma membrane, plastid | 64.6 | 64.18 |
| HORVU0Hr1G031980.1 | Barley | golgi, plasma membrane | 65.04 | 63.64 |
| VIT_18s0001g00260.t01 | Wine grape | plasma membrane | 41.81 | 61.36 |
| Solyc10g074790.1.1 | Tomato | plasma membrane | 36.95 | 39.39 |
| Solyc02g037550.2.1 | Tomato | plasma membrane | 25.0 | 28.54 |
| Solyc04g082830.2.1 | Tomato | plasma membrane | 24.78 | 28.28 |
| Solyc02g082450.2.1 | Tomato | nucleus | 24.78 | 27.65 |
| Solyc03g031990.2.1 | Tomato | golgi, plasma membrane, vacuole | 24.34 | 26.51 |
| Solyc12g095750.1.1 | Tomato | endoplasmic reticulum, plasma membrane, vacuole | 23.89 | 25.78 |
| Solyc03g032080.2.1 | Tomato | golgi, plasma membrane | 12.83 | 23.87 |
Protein Annotations
| EnsemblPlants:Solyc02g091240.1.1 | EnsemblPlantsGene:Solyc02g091240.1 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31419 | PANTHER:PTHR31419:SF2 | PFAM:PF03547 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002767987 | UniProt:K4BCS2 | MapMan:11.2.4.2 | MapMan:24.2.5.2.2 |
Description
No Description!
Coordinates
chr2:-:52599646..52601004
Molecular Weight (calculated)
49932.9 Da
IEP (calculated)
5.862
GRAVY (calculated)
0.573
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPPFSETDV NLYYGGHYLV YAVLPLLKLL CLTVIGLILA HPRTQLVPKA TFKLLSKLVF ALFLPCTIFI HLGETITVKN FMRWWFIPAN VLLSTAIGCL
101: LGYLVAKICK PPPQYFRFTI IATAFGNTGN LPLAIVGSVC HSNDNPFGPD CYTTGVSYVS FAQWVAVLLV YTLVYHMMEP PIEYFDVVDG GGEIQEQLPS
201: NDLSRPLLVE AEWPGMEDRE TVHCKTPFIA RVFTSVSTLS CTSIPDPDSL EEAPAPTSPK SIRCLAEPRV VRKLRIVAEQ TPVRHVLQPP MFAILLAFIV
301: GMVPPIKSVV YGTEAPLEFL TDSLNILAQA MVPSVMLILG GMLAEGPNES ELGVRTTVGI SVARLFVLPL LGTGVVYLAD ELNFLIPDDK MYQFVLLLQY
401: TTPSAILLGA VASLRGYAVR EASALLFWQH VFALFSISMY IIVYFKLLLS YV
101: LGYLVAKICK PPPQYFRFTI IATAFGNTGN LPLAIVGSVC HSNDNPFGPD CYTTGVSYVS FAQWVAVLLV YTLVYHMMEP PIEYFDVVDG GGEIQEQLPS
201: NDLSRPLLVE AEWPGMEDRE TVHCKTPFIA RVFTSVSTLS CTSIPDPDSL EEAPAPTSPK SIRCLAEPRV VRKLRIVAEQ TPVRHVLQPP MFAILLAFIV
301: GMVPPIKSVV YGTEAPLEFL TDSLNILAQA MVPSVMLILG GMLAEGPNES ELGVRTTVGI SVARLFVLPL LGTGVVYLAD ELNFLIPDDK MYQFVLLLQY
401: TTPSAILLGA VASLRGYAVR EASALLFWQH VFALFSISMY IIVYFKLLLS YV
001: MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
101: LVVLICRPPP EFNRFTIVMT AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE YYEVVEEEGV EIEEINVENH
201: DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII
301: GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY
401: STPSAILLGA IASLRGYAVR EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ
Arabidopsis Description
PILS2Protein PIN-LIKES 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C999]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.