CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH06324
KRH06326
KRH06327
KRH09922
KRH16970
KRH22653
KRH23409
KRH26664
KRH47747
KRH47748
KRH47750
KRH53649
KRH64275
KRH72602

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G43520.1	KRH06324	AT1G01010.1	21798944
AT3G43520.1	KRH06326	AT1G01010.1	21798944
AT3G43520.1	KRH06327	AT1G01010.1	21798944
AT3G43520.1	KRH47747	AT1G01010.1	21798944
AT3G43520.1	KRH47748	AT1G01010.1	21798944
AT3G43520.1	KRH47750	AT1G01010.1	21798944
AT3G43520.1	KRH09922	AT3G16310.1	21798944
AT3G43520.1	KRH23409	AT3G16310.1	21798944
AT3G43520.1	KRH16970	AT3G49530.1	21798944
AT3G43520.1	KRH53649	AT3G49530.1	21798944
AT3G43520.1	KRH64275	AT3G49530.1	21798944
AT3G43520.1	KRH72602	AT3G49530.1	21798944
AT3G43520.1	KRH22653	AT5G22290.1	21798944
AT3G43520.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02516	Soybean	plastid	87.28	89.64
GSMUA_Achr5P24090_001	Banana	extracellular, golgi, plasma membrane	35.09	74.07
HORVU2Hr1G112370.1	Barley	golgi, mitochondrion, plastid	30.7	69.31
GSMUA_Achr3P05290_001	Banana	extracellular	33.33	68.47
AT2G26240.1	Thale cress	cytosol, extracellular	32.02	67.59
PGSC0003DMT400040174	Potato	cytosol, peroxisome, plastid	40.79	54.39
TraesCS2B01G534700.1	Wheat	golgi	48.68	53.88
TraesCS2A01G506400.1	Wheat	plastid	48.25	53.4
TraesCS2D01G507100.1	Wheat	golgi	47.81	52.91
CDY11499	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	30.26	51.11
EES12994	Sorghum	plastid	46.49	50.96
Bra007767.1-P	Field mustard	cytosol	28.07	48.85
CDX76725	Canola	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	30.26	47.26
Zm00001d002028_P001	Maize	plastid	38.16	47.03
VIT_07s0130g00480.t01	Wine grape	plastid	49.56	45.94
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular, plasma membrane	17.54	45.45
CDY30952	Canola	plastid	40.35	42.01
Bra019447.1-P	Field mustard	plastid	40.35	42.01
PGSC0003DMT400040170	Potato	plastid	43.42	40.24
PGSC0003DMT400040171	Potato	plastid	43.42	40.24
Solyc11g073240.1.1	Tomato	plastid	42.98	39.36
HORVU2Hr1G112380.1	Barley	peroxisome	36.84	38.71
GSMUA_AchrUn_...	Banana	mitochondrion	15.79	38.3
CDY44845	Canola	plastid	37.72	36.75
AT3G43520.1	Thale cress	plastid	38.6	36.67
Zm00001d026478_P001	Maize	extracellular, plastid	24.12	35.26
Os04t0653100-01	Rice	plasma membrane, plastid	46.93	34.85

Protein Annotations

EMBL:ACUP02008180	EnsemblPlants:KRH19425	EnsemblPlantsGene:GLYMA_13G116300	EntrezGene:100814901	Gene3D:1.20.58.1140	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:TMEM14	PANTHER:PTHR12668	PANTHER:PTHR12668:SF5	PFAM:PF03647
ProteinID:KRH19425	ProteinID:KRH19425.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000233BF07	UniProt:I1LYC8
MapMan:24.2.22	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:22969740..22972442

Molecular Weight (calculated)

22532.8 Da

IEP (calculated)

9.999

GRAVY (calculated)

0.084

Length

228 amino acids

Sequence
(BLAST)

001: MAESVGVAGF GVSGSFSLTR PTIFSRSSNN ISLFRSQSHF PAAAFGSLTR SNPHVHAAVT SDSKAATSLD LTQPDLDNSG GGANGNGGGG GGGGGGGGGG
101: EGGGDNSKGE EGSDGDKRKM ALLMSQKFTL AYAALVGVGG VMGYLKSGSN KSLLAGGLSA SLLYYVYTEL PGSPVFASSV GLGISAALLG VMGSRFKKSG
201: KVFPAGVVSL VSLIMTGGYL HGIMRSAH

Best Arabidopsis Sequence Match ( AT3G43520.1 )
(BLAST)

001: MADLILSSSS AQSSLLHVRP NHYLLNTSTA SPIRSVRFQN SNGFHPLAFA SGHRRLPLGA VVPSDSTKTI TSTITANCVD SGVKAVEVEP TIDYGGGGGI
101: GGDKFGGGGG GGDGNDDGGE DDKEESDGKK STPLSMSQKL TLGYAFLVGV GGLMGYLKSG SQKSLLAGGL SAAVLLYVFS QLPTKPVLAS TVGVVMAGAL
201: MYVMGTRYMR SKKIFPAGVV SIMSFIMTGG YIHGIMRSLH

Arabidopsis Description

FAX2Protein FATTY ACID EXPORT 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q94A32]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.