Factsheet for HORVU2Hr1G034610.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G081700.1
HORVU1Hr1G082010.3
HORVU3Hr1G030760.2
HORVU3Hr1G069970.2
HORVU7Hr1G075700.2
HORVU7Hr1G081290.4
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01430.1	HORVU1Hr1G081700.1	AT2G20130.1	21798944
AT5G01430.1	HORVU1Hr1G082010.3	AT4G11220.1	21798944
AT5G01430.1	HORVU3Hr1G030760.2	AT4G11220.1	21798944
AT5G01430.1	HORVU3Hr1G069970.2	AT4G11220.1	21798944
AT5G01430.1	HORVU7Hr1G075700.2	AT4G11220.1	21798944
AT5G01430.1	HORVU7Hr1G081290.4	AT4G11220.1	21798944
AT5G01430.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G191300.1	Wheat	plasma membrane	73.75	84.29
TraesCS2B01G210100.1	Wheat	cytosol, plasma membrane, vacuole	76.88	77.85
Os07t0593400-00	Rice	extracellular, plasma membrane	53.75	77.48
Zm00001d037011_P001	Maize	extracellular	29.38	72.31
EER97480	Sorghum	plasma membrane	62.5	71.43
Zm00001d022026_P001	Maize	cytosol, plasma membrane, vacuole	63.12	70.63
GSMUA_Achr1P09820_001	Banana	extracellular, plasma membrane, vacuole	55.62	63.57
VIT_02s0012g00510.t01	Wine grape	extracellular, plasma membrane, vacuole	54.38	62.14
PGSC0003DMT400054623	Potato	plasma membrane	51.88	61.48
Bra028903.1-P	Field mustard	plasma membrane	53.75	61.43
CDY04837	Canola	plasma membrane	53.75	61.43
KRH50610	Soybean	extracellular, plasma membrane, vacuole	53.75	61.43
AT3G49420.2	Thale cress	plasma membrane	52.5	60.0
GSMUA_AchrUn_...	Banana	plasma membrane	52.5	60.0
CDY11201	Canola	plasma membrane	52.5	60.0
CDX80773	Canola	plasma membrane	52.5	60.0
Bra005686.1-P	Field mustard	plasma membrane	52.5	60.0
AT5G01430.1	Thale cress	plasma membrane	52.5	60.0
GSMUA_Achr4P06120_001	Banana	plasma membrane	51.88	59.29
Solyc02g069610.2.1	Tomato	extracellular, plasma membrane, vacuole	51.88	59.29
KRH73542	Soybean	extracellular, plasma membrane, vacuole	51.25	58.57
PGSC0003DMT400062004	Potato	plasma membrane	51.25	58.57
KRH14583	Soybean	extracellular, plasma membrane, vacuole	50.62	57.86
CDY49931	Canola	plasma membrane	45.62	54.07
CDY21217	Canola	plasma membrane	46.88	53.57
Bra021367.1-P	Field mustard	plasma membrane	46.25	50.0
KRG89688	Soybean	plasma membrane	53.12	44.04
HORVU4Hr1G069200.3	Barley	plastid	57.5	42.4
AT3G03180.3	Thale cress	plasma membrane	47.5	39.58
HORVU6Hr1G054720.6	Barley	plasma membrane, vacuole	33.12	33.76

Protein Annotations

EnsemblPlants:HORVU2Hr1G034610.1	EnsemblPlantsGene:HORVU2Hr1G034610	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016192	InterPro:Vesicle_transpt_Got1/SFT2	PANTHER:PTHR21493	PANTHER:PTHR21493:SF9	PFAM:PF04178
SEG:seg	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI000B466A8F	UniProt:A0A287HNM2	MapMan:35.1

Description

No Description!

Coordinates

chrchr2H:+:142539665..142542646

Molecular Weight (calculated)

17470.7 Da

IEP (calculated)

10.323

GRAVY (calculated)

0.744

Length

160 amino acids

Sequence
(BLAST)

001: MLQRLDPLTW FFCPSLLLQA VAARARVAAG GRDVVSYFPT EIGLGLTGFG VLFSFLGILM LFDKGFLAMG NILFVSGVSL TIGLKSTVQF FTKPKNHKGS
101: IAFGIGLFLV LIGWPVFGMM AESYGFAALF SGFWPTAAVY LQKNPTVGWI FQHPYVTSVR

Best Arabidopsis Sequence Match ( AT3G49420.1 )
(BLAST)

001: MMSFEMNDRK KIGLGLTGFG VFFSFLGIVF VFDKGLLAMG NILFISGVSL TIGFKSTMQF FMKRQNYKGT ISFGVGFFFV IIGWPILGMM LETYGFFVLF
101: SGFWPTLAVF AQKIPVLGWI IQQPYIRSFF DKYRGKRVPV

Arabidopsis Description

At3g49420 [Source:UniProtKB/TrEMBL;Acc:Q9SCL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.