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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, plasma membrane, vacuole

Predictor Summary:
  • plastid 1
  • nucleus 1
  • mitochondrion 1
  • extracellular 2
  • plasma membrane 3
  • vacuole 3
  • golgi 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
EpiLoc:nucleus
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plasma membrane, vacuole
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr3P15700_001
GSMUA_Achr3P15760_001
GSMUA_Achr3P31920_001
GSMUA_Achr4P08400_001
GSMUA_Achr4P10230_001
GSMUA_Achr5P06850_001
GSMUA_Achr6P22910_001
GSMUA_Achr6P31860_001
GSMUA_Achr8P27800_001
GSMUA_Achr8P27830_001
GSMUA_Achr9P05440_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G01430.1 GSMUA_Achr10P... AT2G20130.1 21798944
AT5G01430.1 GSMUA_Achr3P15700_001 AT2G20130.1 21798944
AT5G01430.1 GSMUA_Achr6P22910_001 AT2G20130.1 21798944
AT5G01430.1 GSMUA_Achr8P27800_001 AT2G20130.1 21798944
AT5G01430.1 GSMUA_Achr10P... AT4G11220.1 21798944
AT5G01430.1 GSMUA_Achr3P15760_001 AT4G11220.1 21798944
AT5G01430.1 GSMUA_Achr3P31920_001 AT4G11220.1 21798944
AT5G01430.1 GSMUA_Achr4P08400_001 AT4G11220.1 21798944
AT5G01430.1 GSMUA_Achr5P06850_001 AT4G11220.1 21798944
AT5G01430.1 GSMUA_Achr6P31860_001 AT4G11220.1 21798944
AT5G01430.1 GSMUA_Achr8P27830_001 AT4G11220.1 21798944
AT5G01430.1 GSMUA_Achr9P05440_001 AT4G11220.1 21798944
AT5G01430.1 GSMUA_AchrUn_... AT4G11220.1 21798944
AT5G01430.1 GSMUA_Achr4P10230_001 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G252900.1 Wheat plasma membrane 90.0 90.0
TraesCS4B01G252600.1 Wheat plasma membrane 90.0 90.0
TraesCS4A01G051600.1 Wheat plasma membrane 90.0 90.0
Os03t0209400-01 Rice plasma membrane 89.29 89.29
EER95301 Sorghum endoplasmic reticulum, extracellular, plasma membrane 89.29 89.29
Zm00001d028040_P002 Maize plasma membrane 88.57 88.57
GSMUA_AchrUn_... Banana plasma membrane 85.71 85.71
GSMUA_Achr4P06120_001 Banana plasma membrane 84.29 84.29
KRH50610 Soybean extracellular, plasma membrane, vacuole 82.86 82.86
PGSC0003DMT400062004 Potato plasma membrane 81.43 81.43
Os10t0337600-01 Rice extracellular, plasma membrane, vacuole 81.43 81.43
KRH73542 Soybean extracellular, plasma membrane, vacuole 81.43 81.43
PGSC0003DMT400054623 Potato plasma membrane 77.86 80.74
VIT_02s0012g00510.t01 Wine grape extracellular, plasma membrane, vacuole 80.71 80.71
KRH14583 Soybean extracellular, plasma membrane, vacuole 80.71 80.71
Solyc02g069610.2.1 Tomato extracellular, plasma membrane, vacuole 79.29 79.29
CDX80773 Canola plasma membrane 78.57 78.57
CDY11201 Canola plasma membrane 77.86 77.86
Bra005686.1-P Field mustard plasma membrane 77.86 77.86
AT3G49420.2 Thale cress plasma membrane 77.14 77.14
CDY04837 Canola plasma membrane 77.14 77.14
Bra028903.1-P Field mustard plasma membrane 77.14 77.14
AT5G01430.1 Thale cress plasma membrane 77.14 77.14
EER97480 Sorghum plasma membrane 76.43 76.43
CDY21217 Canola plasma membrane 75.0 75.0
CDY49931 Canola plasma membrane 72.14 74.81
TraesCS2D01G191300.1 Wheat plasma membrane 74.29 74.29
Zm00001d022026_P001 Maize cytosol, plasma membrane, vacuole 73.57 72.03
Zm00001d037011_P001 Maize extracellular 31.43 67.69
Os07t0593400-00 Rice extracellular, plasma membrane 53.57 67.57
Bra021367.1-P Field mustard plasma membrane 69.29 65.54
TraesCS2B01G210100.1 Wheat cytosol, plasma membrane, vacuole 73.57 65.19
Zm00001d048122_P003 Maize plasma membrane 89.29 62.19
KRG89688 Soybean plasma membrane 84.29 61.14
HORVU4Hr1G069200.3 Barley plastid 89.29 57.6
HORVU2Hr1G034610.1 Barley extracellular 63.57 55.62
AT3G03180.3 Thale cress plasma membrane 70.0 51.04
Protein Annotations
EnsemblPlants:GSMUA_Achr1P09820_001EnsemblPlants:GSMUA_Achr1T09820_001EnsemblPlantsGene:GSMUA_Achr1G09820_001GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016192InterPro:Vesicle_transpt_Got1/SFT2PANTHER:PTHR21493PANTHER:PTHR21493:SF9
PFAM:PF04178SEG:segTMHMM:TMhelixUniParc:UPI0002948306UniProt:M0RYJ1MapMan:35.1
Description
Putative Vesicle transport protein GOT1A [Source:GMGC_GENE;Acc:GSMUA_Achr1G09820_001]
Coordinates
chr1:-:7490862..7496554
Molecular Weight (calculated)
15837.0 Da
IEP (calculated)
10.871
GRAVY (calculated)
0.788
Length
140 amino acids
Sequence
(BLAST)
001: MVSFEMNDRK KIGLGLTGFG VFFSFLGIIF FFDKGLLAMG NILFLSGLML TIGLKSTMQF FTKPKNYKGT ISFGAGFFLV LIGWPIIGMI VESYGFIVLF
101: SGFWPTVAVF LQRIPIFGWL FQQPFVTSLL ERYRGKRVPV
Best Arabidopsis Sequence Match ( AT5G01430.1 )
(BLAST)
001: MMSFEMNDRK KIGLGLTGFG VFFSFLGIVF VFDKGLLAMG NILFISGVSL TIGFKSTMQF FMKRQNYKGT ISFGVGFFFV IIGWPILGMM LETYGFFVLF
101: SGFWPTLAVF AQKIPVLGWI IQQPYIRSFF DKYRGKRVPV
Arabidopsis Description
At3g49420 [Source:UniProtKB/TrEMBL;Acc:Q9SCL4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.