Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY21217 | Canola | plasma membrane | 97.78 | 94.29 |
| Bra021367.1-P | Field mustard | plasma membrane | 91.11 | 83.11 |
| PGSC0003DMT400054623 | Potato | plasma membrane | 77.04 | 77.04 |
| TraesCS4B01G252600.1 | Wheat | plasma membrane | 75.56 | 72.86 |
| TraesCS4A01G051600.1 | Wheat | plasma membrane | 75.56 | 72.86 |
| TraesCS4D01G252900.1 | Wheat | plasma membrane | 75.56 | 72.86 |
| Solyc02g069610.2.1 | Tomato | extracellular, plasma membrane, vacuole | 75.56 | 72.86 |
| GSMUA_Achr1P09820_001 | Banana | extracellular, plasma membrane, vacuole | 74.81 | 72.14 |
| Os03t0209400-01 | Rice | plasma membrane | 74.81 | 72.14 |
| CDX80773 | Canola | plasma membrane | 74.81 | 72.14 |
| EER95301 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 74.07 | 71.43 |
| CDY11201 | Canola | plasma membrane | 74.07 | 71.43 |
| Zm00001d028040_P002 | Maize | plasma membrane | 73.33 | 70.71 |
| CDY04837 | Canola | plasma membrane | 73.33 | 70.71 |
| GSMUA_Achr4P06120_001 | Banana | plasma membrane | 72.59 | 70.0 |
| PGSC0003DMT400062004 | Potato | plasma membrane | 71.11 | 68.57 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 68.15 | 65.71 |
| Os10t0337600-01 | Rice | extracellular, plasma membrane, vacuole | 66.67 | 64.29 |
| EER97480 | Sorghum | plasma membrane | 64.44 | 62.14 |
| Zm00001d022026_P001 | Maize | cytosol, plasma membrane, vacuole | 65.19 | 61.54 |
| AT3G03180.3 | Thale cress | plasma membrane | 87.41 | 61.46 |
| TraesCS2D01G191300.1 | Wheat | plasma membrane | 62.96 | 60.71 |
| Os07t0593400-00 | Rice | extracellular, plasma membrane | 47.41 | 57.66 |
| Zm00001d037011_P001 | Maize | extracellular | 26.67 | 55.38 |
| TraesCS2B01G210100.1 | Wheat | cytosol, plasma membrane, vacuole | 62.22 | 53.16 |
| Zm00001d048122_P003 | Maize | plasma membrane | 74.81 | 50.25 |
| HORVU4Hr1G069200.3 | Barley | plastid | 75.56 | 47.0 |
| HORVU2Hr1G034610.1 | Barley | extracellular | 54.07 | 45.62 |
Protein Annotations
| EnsemblPlants:CDY49931 | EnsemblPlantsGene:GSBRNA2T00094098001 | GO:A0A078IIY9 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Vesicle_transpt_Got1/SFT2 | PANTHER:PTHR21493 | PANTHER:PTHR21493:SF9 |
| PFAM:PF04178 | ProteinID:CDY49931 | ProteinID:CDY49931.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EB7B4E |
| UniProt:A0A078IIY9 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng18410DBnaCnng18410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIY9]
Coordinates
chrLK032869:+:37318..38381
Molecular Weight (calculated)
15135.3 Da
IEP (calculated)
11.565
GRAVY (calculated)
0.887
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDLKKIGLG LTGFGVFFTL LGVIFVFDKG LIAMGNILFL AGVTLTIGIQ PAIQFFTKRR NFKGTISFGL GFLLVVLGWP IIGLLLESYG FLVLFSGFWP
101: TLAVFLQRIP ILGWLLQHPY IRSLLDRYRG RRVPV
101: TLAVFLQRIP ILGWLLQHPY IRSLLDRYRG RRVPV
001: MASLEMNDLK KIGLGLTGFG VFFTFLGVIF VFDKGLIAMG NILFLAGVTL TIGINPAIQF FTKRQNFKGT ISFGLGFLLV VFGWPIFGLL LESYGFLVLF
101: SGFWPTLAVF LQRIPLLGWL LQQPYIRSLL DRYRGRRVPV
101: SGFWPTLAVF LQRIPLLGWL LQQPYIRSLL DRYRGRRVPV
Arabidopsis Description
Got1/Sft2-like vescicle transport protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRD1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.