Factsheet for Os10t0337600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

plastid 2
nucleus 1
extracellular 3
plasma membrane 4
vacuole 4
endoplasmic reticulum 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0226300-01
Os01t0736900-01
Os02t0265900-01
Os02t0269000-01
Os05t0526400-01
Os05t0529000-01
Os06t0503400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01430.1	Os02t0269000-01	AT2G20130.1	21798944
AT5G01430.1	Os05t0529000-01	AT2G20130.1	21798944
AT5G01430.1	Os01t0226300-01	AT4G11220.1	21798944
AT5G01430.1	Os01t0736900-01	AT4G11220.1	21798944
AT5G01430.1	Os02t0265900-01	AT4G11220.1	21798944
AT5G01430.1	Os05t0526400-01	AT4G11220.1	21798944
AT5G01430.1	Os06t0503400-01	AT4G11220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0209400-01	Rice	plasma membrane	87.86	87.86
GSMUA_Achr1P09820_001	Banana	extracellular, plasma membrane, vacuole	81.43	81.43
GSMUA_AchrUn_...	Banana	plasma membrane	80.0	80.0
PGSC0003DMT400062004	Potato	plasma membrane	77.86	77.86
VIT_02s0012g00510.t01	Wine grape	extracellular, plasma membrane, vacuole	77.14	77.14
GSMUA_Achr4P06120_001	Banana	plasma membrane	75.71	75.71
PGSC0003DMT400054623	Potato	plasma membrane	72.86	75.56
Solyc02g069610.2.1	Tomato	extracellular, plasma membrane, vacuole	74.29	74.29
CDX80773	Canola	plasma membrane	72.86	72.86
CDY04837	Canola	plasma membrane	72.86	72.86
CDY11201	Canola	plasma membrane	72.86	72.86
Bra005686.1-P	Field mustard	plasma membrane	72.86	72.86
Bra028903.1-P	Field mustard	plasma membrane	72.86	72.86
KRH14583	Soybean	extracellular, plasma membrane, vacuole	72.14	72.14
AT3G49420.2	Thale cress	plasma membrane	72.14	72.14
AT5G01430.1	Thale cress	plasma membrane	72.14	72.14
KRH73542	Soybean	extracellular, plasma membrane, vacuole	72.14	72.14
KRH50610	Soybean	extracellular, plasma membrane, vacuole	71.43	71.43
CDY21217	Canola	plasma membrane	67.86	67.86
CDY49931	Canola	plasma membrane	64.29	66.67
Os07t0593400-00	Rice	extracellular, plasma membrane	52.14	65.77
Bra021367.1-P	Field mustard	plasma membrane	65.0	61.49
KRG89688	Soybean	plasma membrane	72.86	52.85
Os02t0602800-01	Rice	plasma membrane	48.57	50.37
AT3G03180.3	Thale cress	plasma membrane	67.14	48.96
Os07t0593332-00	Rice	plasma membrane	7.86	12.94

Protein Annotations

EMBL:AK240825	EnsemblPlants:Os10t0337600-01	EnsemblPlantsGene:Os10g0337600	EntrezGene:9271603	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:Vesicle_transpt_Got1/SFT2	PANTHER:PTHR21493
PANTHER:PTHR21493:SF9	PFAM:PF04178	ProteinID:BAT10390.1	ProteinID:EEE50767.1	RefSeq:XP_015613381.1	RefSeq:XP_015613382.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000188AFA4	UniProt:B7F8C6	MapMan:35.1	:

Description

Similar to Got1-like family protein, expressed. (Os10t0337600-01)

Coordinates

chr10:-:9776979..9781629

Molecular Weight (calculated)

15592.7 Da

IEP (calculated)

10.410

GRAVY (calculated)

0.906

Length

140 amino acids

Sequence
(BLAST)

001: MVSFEMNDLQ KIGIGLTGFG VFFSFLGIIF FFDKGLLAMG NILFLSGLGL TIGLKSTLQF FTKPKNYKGT ISFGAGLLLV LIGWPFFGML LEAYGFIVLF
101: SGFWPTLVVF LQKIPFIGWI FQQPFVASYL GSYRGKRVPV

Best Arabidopsis Sequence Match ( AT5G01430.1 )
(BLAST)

001: MMSFEMNDRK KIGLGLTGFG VFFSFLGIVF VFDKGLLAMG NILFISGVSL TIGFKSTMQF FMKRQNYKGT ISFGVGFFFV IIGWPILGMM LETYGFFVLF
101: SGFWPTLAVF AQKIPVLGWI IQQPYIRSFF DKYRGKRVPV

Arabidopsis Description

At3g49420 [Source:UniProtKB/TrEMBL;Acc:Q9SCL4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.