Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
18260611
plasma membrane: 27800704 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0602800-01 | Rice | plasma membrane | 15.29 | 9.63 |
| Os07t0593400-00 | Rice | extracellular, plasma membrane | 11.76 | 9.01 |
| Os10t0337600-01 | Rice | extracellular, plasma membrane, vacuole | 12.94 | 7.86 |
| Os03t0209400-01 | Rice | plasma membrane | 11.76 | 7.14 |
Protein Annotations
| EnsemblPlants:Os07t0593332-00 | EnsemblPlantsGene:Os07g0593332 | Gene3D:1.10.246.200 | InterPro:IPR038214 | InterPro:WPP_dom | InterPro:WPP_sf |
| PANTHER:PTHR34362 | PANTHER:PTHR34362:SF3 | PFAM:PF13943 | ProteinID:BAT02459.1 | SEG:seg | UniParc:UPI000393B8E3 |
| UniProt:A0A0P0X830 | MapMan:35.2 | : | : | : | : |
Description
Similar to MFP1 attachment factor 1. (Os07t0593332-00)
Coordinates
chr7:+:24177644..24178121
Molecular Weight (calculated)
8209.2 Da
IEP (calculated)
3.997
GRAVY (calculated)
-0.025
Length
85 amino acids
Sequence
(BLAST)
(BLAST)
1: AEAGRAAAAV EAEAYAAVTE SSSAAAAPAS VEDGIEVLQA YSKEVSRRLL ELAKSRAAPS PAAAAPAEGA ASESEAAAAP APAEE
001: MAETETESIT TSSPPPISET ENSTTLPTTE TEKNPNPVTI SLRIWPPTQK TRDAVINRLI ETLSTESILS KRFGSLESEE ASSVAKSIED EAYAIASATV
101: FGDDDGIEIL KAYSKEISKR MLESVKAKSN VASPPPKDGD GIESAVDSKI DSSEA
101: FGDDDGIEIL KAYSKEISKR MLESVKAKSN VASPPPKDGD GIESAVDSKI DSSEA
Arabidopsis Description
WPP1WPP domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.