Factsheet for Bra021367.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
extracellular 2
plasma membrane 4
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21217	Canola	plasma membrane	88.51	93.57
CDY49931	Canola	plasma membrane	83.11	91.11
PGSC0003DMT400054623	Potato	plasma membrane	66.22	72.59
Solyc02g069610.2.1	Tomato	extracellular, plasma membrane, vacuole	67.57	71.43
Bra005686.1-P	Field mustard	plasma membrane	66.89	70.71
TraesCS4B01G252600.1	Wheat	plasma membrane	66.22	70.0
TraesCS4A01G051600.1	Wheat	plasma membrane	66.22	70.0
TraesCS4D01G252900.1	Wheat	plasma membrane	66.22	70.0
GSMUA_Achr1P09820_001	Banana	extracellular, plasma membrane, vacuole	65.54	69.29
Os03t0209400-01	Rice	plasma membrane	65.54	69.29
EER95301	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	64.86	68.57
Bra028903.1-P	Field mustard	plasma membrane	64.86	68.57
Zm00001d028040_P002	Maize	plasma membrane	64.19	67.86
PGSC0003DMT400062004	Potato	plasma membrane	64.19	67.86
GSMUA_Achr4P06120_001	Banana	plasma membrane	63.51	67.14
AT3G03180.3	Thale cress	plasma membrane	85.14	65.62
Os10t0337600-01	Rice	extracellular, plasma membrane, vacuole	61.49	65.0
GSMUA_AchrUn_...	Banana	plasma membrane	60.14	63.57
EER97480	Sorghum	plasma membrane	57.43	60.71
Zm00001d022026_P001	Maize	cytosol, plasma membrane, vacuole	57.43	59.44
TraesCS2D01G191300.1	Wheat	plasma membrane	56.08	59.29
Zm00001d037011_P001	Maize	extracellular	25.0	56.92
Os07t0593400-00	Rice	extracellular, plasma membrane	39.86	53.15
TraesCS2B01G210100.1	Wheat	cytosol, plasma membrane, vacuole	55.41	51.9
Zm00001d048122_P003	Maize	plasma membrane	66.22	48.76
HORVU2Hr1G034610.1	Barley	extracellular	50.0	46.25
HORVU4Hr1G069200.3	Barley	plastid	66.22	45.16
Bra015452.1-P	Field mustard	extracellular	43.24	37.43

Protein Annotations

EnsemblPlants:Bra021367.1	EnsemblPlants:Bra021367.1-P	EnsemblPlantsGene:Bra021367	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016192	InterPro:Vesicle_transpt_Got1/SFT2	PANTHER:PTHR21493	PANTHER:PTHR21493:SF97
PFAM:PF04178	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002544E86	UniProt:M4DXX1	MapMan:35.1

Description

AT3G03180 (E=3e-052) | Got1-like family protein

Coordinates

chrA01:+:25533693..25534675

Molecular Weight (calculated)

16602.0 Da

IEP (calculated)

10.291

GRAVY (calculated)

1.001

Length

148 amino acids

Sequence
(BLAST)

001: MASFEMNDLK KIGLGLTGFG VFFTFLGVIF VFDKGLIAMG NILFLAGVTL TIGIQPAIQF FTKRRNFKGT ISFGLGFLLV VFGWPILGLL LESYGFLVLF
101: SGFWPTLAVF LQRIPILGWL LQHPYIRSVH FALISIYFHS LLNRDICA

Best Arabidopsis Sequence Match ( AT3G03180.3 )
(BLAST)

001: MASLEMNDLK KIGLGLTGFG VFFTFLGVIF VFDKGLIAMG NILFLAGVTL TIGINPAIQF FTKRQNFKGT ISFGLGFLLV VFGWPIFGLL LESYGFLVLF
101: SGFWPTLAVF LQRIPLLGWL LQQPYIRSVH SLQLLSVLLF RLICLIQSNF YQLYILVTES VAGSLPWKAC PCLNLLCLSF FLFVCELTTI QL

Arabidopsis Description

Got1/Sft2-like vescicle transport protein family [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRD1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.