Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- extracellular 4
- plasma membrane 4
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G05785.6 | Thale cress | plasma membrane | 70.76 | 69.94 |
| PGSC0003DMT400055667 | Potato | extracellular, plasma membrane, vacuole | 47.95 | 63.08 |
| Solyc09g098500.2.1 | Tomato | extracellular, plasma membrane, vacuole | 47.37 | 62.31 |
| TraesCS6D01G197200.1 | Wheat | plasma membrane | 48.54 | 61.94 |
| TraesCS6A01G214500.1 | Wheat | plasma membrane | 47.95 | 61.19 |
| TraesCS6B01G244500.1 | Wheat | plasma membrane | 47.95 | 61.19 |
| EES05385 | Sorghum | plasma membrane | 47.95 | 60.74 |
| Zm00001d051009_P002 | Maize | plasma membrane | 47.95 | 60.74 |
| Os02t0602800-01 | Rice | plasma membrane | 46.78 | 59.26 |
| KRH46892 | Soybean | plasma membrane | 47.95 | 58.99 |
| VIT_05s0124g00090.t01 | Wine grape | cytosol, plasma membrane, vacuole | 52.05 | 55.97 |
| KRH01801 | Soybean | endoplasmic reticulum, plasma membrane | 51.46 | 50.57 |
| HORVU6Hr1G054720.6 | Barley | plasma membrane, vacuole | 46.2 | 50.32 |
| Bra005686.1-P | Field mustard | plasma membrane | 36.84 | 45.0 |
| Bra028903.1-P | Field mustard | plasma membrane | 36.26 | 44.29 |
| Bra021367.1-P | Field mustard | plasma membrane | 37.43 | 43.24 |
Protein Annotations
| EnsemblPlants:Bra015452.1 | EnsemblPlants:Bra015452.1-P | EnsemblPlantsGene:Bra015452 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Vesicle_transpt_Got1/SFT2 | PANTHER:PTHR21493 | PANTHER:PTHR21493:SF97 |
| PFAM:PF04178 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000254370E | UniProt:M4DG29 | MapMan:35.1 |
Description
AT1G05785 (E=7e-054) | Got1-like family protein
Coordinates
chrA10:-:1683631..1684608
Molecular Weight (calculated)
19417.5 Da
IEP (calculated)
9.745
GRAVY (calculated)
0.878
Length
171 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYELTEQKK VGLGLIGFGL SFSFLGVILY FDRGLLALGN LFWLIGVGLL LGWQSTWRLF TNVNNLKGTV CFVLGLFLIF VRWPIIGIIL ETYGCIVLFG
101: GFWSTVKMFL SQIPFVGWMI QYPLMVSNPR QYFPCLLPFA FRTNIQSLGY CLKFIACVPL WFAKLASLGN R
101: GFWSTVKMFL SQIPFVGWMI QYPLMVSNPR QYFPCLLPFA FRTNIQSLGY CLKFIACVPL WFAKLASLGN R
001: MVYEITEQKK VGLGLIGFGL SFTFLGVILY FDRGLLALGN LFWLIGVGLL LGWQSTWRVF TNVNNLRGTI CFVLGLFLIF VRWPIIGIIL EIYGVIVLFG
101: GFWSTVKAFL SQIPFVGWII QYPLMVSNPQ QHLPFPLMLL SYAFCTFRAS CQGLVLEQHP VLLPQFIQSL VVA
101: GFWSTVKAFL SQIPFVGWII QYPLMVSNPQ QHLPFPLMLL SYAFCTFRAS CQGLVLEQHP VLLPQFIQSL VVA
Arabidopsis Description
Got1/Sft2-like vescicle transport protein family [Source:TAIR;Acc:AT1G05785]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.