Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 3
- plasma membrane 5
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015452.1-P | Field mustard | extracellular | 69.94 | 70.76 |
| PGSC0003DMT400055667 | Potato | extracellular, plasma membrane, vacuole | 46.82 | 62.31 |
| Solyc09g098500.2.1 | Tomato | extracellular, plasma membrane, vacuole | 46.82 | 62.31 |
| TraesCS6D01G197200.1 | Wheat | plasma membrane | 47.4 | 61.19 |
| TraesCS6A01G214500.1 | Wheat | plasma membrane | 46.82 | 60.45 |
| TraesCS6B01G244500.1 | Wheat | plasma membrane | 46.82 | 60.45 |
| EES05385 | Sorghum | plasma membrane | 46.82 | 60.0 |
| Zm00001d051009_P002 | Maize | plasma membrane | 46.82 | 60.0 |
| Os02t0602800-01 | Rice | plasma membrane | 46.24 | 59.26 |
| KRH46892 | Soybean | plasma membrane | 47.4 | 58.99 |
| VIT_05s0124g00090.t01 | Wine grape | cytosol, plasma membrane, vacuole | 52.02 | 56.6 |
| KRH01801 | Soybean | endoplasmic reticulum, plasma membrane | 51.45 | 51.15 |
| HORVU6Hr1G054720.6 | Barley | plasma membrane, vacuole | 43.35 | 47.77 |
| AT3G49420.2 | Thale cress | plasma membrane | 36.42 | 45.0 |
| AT5G01430.1 | Thale cress | plasma membrane | 36.42 | 45.0 |
| AT3G03180.3 | Thale cress | plasma membrane | 38.15 | 34.38 |
Protein Annotations
| MapMan:35.1 | EntrezGene:837087 | UniProt:A0A1P8AP81 | ProteinID:ANM58442.1 | ProteinID:ANM58443.1 | ArrayExpress:AT1G05785 |
| EnsemblPlantsGene:AT1G05785 | RefSeq:AT1G05785 | TAIR:AT1G05785 | RefSeq:AT1G05785-TAIR-G | EnsemblPlants:AT1G05785.6 | Unigene:At.44739 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 |
| RefSeq:NP_001320876.1 | RefSeq:NP_001320877.1 | PFAM:PF04178 | PANTHER:PTHR21493 | PANTHER:PTHR21493:SF97 | TMHMM:TMhelix |
| UniParc:UPI000848FFF7 | InterPro:Vesicle_transpt_Got1/SFT2 | SEG:seg | : | : | : |
Description
Got1/Sft2-like vescicle transport protein family [Source:TAIR;Acc:AT1G05785]
Coordinates
chr1:+:1730243..1732657
Molecular Weight (calculated)
19534.7 Da
IEP (calculated)
8.848
GRAVY (calculated)
1.002
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MVYEITEQKK VGLGLIGFGL SFTFLGVILY FDRGLLALGN LFWLIGVGLL LGWQSTWRVF TNVNNLRGTI CFVLGLFLIF VRWPIIGIIL EIYGVIVLFG
101: GFWSTVKAFL SQIPFVGWII QYPLMVSNPQ QHLPFPLMLL SYAFCTFRAS CQGLVLEQHP VLLPQFIQSL VVA
101: GFWSTVKAFL SQIPFVGWII QYPLMVSNPQ QHLPFPLMLL SYAFCTFRAS CQGLVLEQHP VLLPQFIQSL VVA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.