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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • plastid 2
  • nucleus 1
  • extracellular 3
  • plasma membrane 4
  • vacuole 4
  • endoplasmic reticulum 2
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400055667 Potato extracellular, plasma membrane, vacuole 99.23 99.23
KRH46892 Soybean plasma membrane 63.85 59.71
TraesCS6B01G244500.1 Wheat plasma membrane 60.0 58.21
TraesCS6D01G197200.1 Wheat plasma membrane 60.0 58.21
Zm00001d051009_P002 Maize plasma membrane 60.0 57.78
VIT_05s0124g00090.t01 Wine grape cytosol, plasma membrane, vacuole 70.0 57.23
EES05385 Sorghum plasma membrane 59.23 57.04
Os02t0602800-01 Rice plasma membrane 59.23 57.04
TraesCS6A01G214500.1 Wheat plasma membrane 58.46 56.72
KRH01801 Soybean endoplasmic reticulum, plasma membrane 65.38 48.85
Bra015452.1-P Field mustard extracellular 62.31 47.37
AT1G05785.6 Thale cress plasma membrane 62.31 46.82
Solyc02g069610.2.1 Tomato extracellular, plasma membrane, vacuole 50.0 46.43
HORVU6Hr1G054720.6 Barley plasma membrane, vacuole 51.54 42.68
Protein Annotations
EnsemblPlants:Solyc09g098500.2.1EnsemblPlantsGene:Solyc09g098500.2GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016192InterPro:Vesicle_transpt_Got1/SFT2PANTHER:PTHR21493PANTHER:PTHR21493:SF97PFAM:PF04178
SEG:segTMHMM:TMhelixUniParc:UPI000276C368UniProt:K4CX20MapMan:35.2:
Description
No Description!
Coordinates
chr9:+:72296997..72301285
Molecular Weight (calculated)
14808.0 Da
IEP (calculated)
9.591
GRAVY (calculated)
1.203
Length
130 amino acids
Sequence
(BLAST)
001: MTYELDEQKK VGLGLIGFGI FFTFLAIMLF FDRGLLALAN ILLLAGVALL LGLRSTLQLF KVNYKGTISF MLGLFLIFVR WPVVGIIVEI YGCIILFGCF
101: WPSIKVFLFQ IPVFGWILQY PALLLDRFRS
Best Arabidopsis Sequence Match ( AT1G05785.1 )
(BLAST)
001: MVYEITEQKK VGLGLIGFGL SFTFLGVILY FDRGLLALGN LFWLIGVGLL LGWQSTWRVF TNVNNLRGTI CFVLGLFLIF VRWPIIGIIL EIYGVIVLFG
101: GFWSTVKAFL SQIPFVGWII QYPLMVLEQL VRGAR
Arabidopsis Description
Got1/Sft2-like vescicle transport protein family [Source:TAIR;Acc:AT1G05785]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.