Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH46892 | Soybean | plasma membrane | 68.39 | 85.61 |
| PGSC0003DMT400055667 | Potato | extracellular, plasma membrane, vacuole | 49.43 | 66.15 |
| Solyc09g098500.2.1 | Tomato | extracellular, plasma membrane, vacuole | 48.85 | 65.38 |
| TraesCS6D01G197200.1 | Wheat | plasma membrane | 48.85 | 63.43 |
| TraesCS6A01G214500.1 | Wheat | plasma membrane | 48.85 | 63.43 |
| TraesCS6B01G244500.1 | Wheat | plasma membrane | 48.28 | 62.69 |
| Zm00001d051009_P002 | Maize | plasma membrane | 47.7 | 61.48 |
| EES05385 | Sorghum | plasma membrane | 47.7 | 61.48 |
| Os02t0602800-01 | Rice | plasma membrane | 47.7 | 61.48 |
| VIT_05s0124g00090.t01 | Wine grape | cytosol, plasma membrane, vacuole | 54.6 | 59.75 |
| Bra015452.1-P | Field mustard | extracellular | 50.57 | 51.46 |
| AT1G05785.6 | Thale cress | plasma membrane | 51.15 | 51.45 |
| HORVU6Hr1G054720.6 | Barley | plasma membrane, vacuole | 45.4 | 50.32 |
| KRH73542 | Soybean | extracellular, plasma membrane, vacuole | 39.08 | 48.57 |
| KRH50610 | Soybean | extracellular, plasma membrane, vacuole | 37.93 | 47.14 |
| KRH14583 | Soybean | extracellular, plasma membrane, vacuole | 37.93 | 47.14 |
| KRG89688 | Soybean | plasma membrane | 40.23 | 36.27 |
Protein Annotations
| EMBL:ACUP02011533 | EnsemblPlants:KRH01801 | EnsemblPlantsGene:GLYMA_18G299400 | EntrezGene:100775591 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | InterPro:Vesicle_transpt_Got1/SFT2 | PANTHER:PTHR21493 |
| PANTHER:PTHR21493:SF97 | PFAM:PF04178 | ProteinID:KRH01801 | ProteinID:KRH01801.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000233E118 | UniProt:A0A0R0FG30 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:57719034..57721765
Molecular Weight (calculated)
19515.7 Da
IEP (calculated)
9.694
GRAVY (calculated)
1.248
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYEITEIKK IGIGLIGFGL FFTFLGIILF FDRGLLALGN IFSLAGVGIL LGWRSTWALF TNRANFKGSA SFLLGLFFIF VRWPIVGIIL EIYGCVFLFS
101: GFWSSIKVFL YHIPVVGWII QFISLAILQY IILLVFLGID HYVLLSKIDD YSVAGVILVL LRFSTSLMLA THKG
101: GFWSSIKVFL YHIPVVGWII QFISLAILQY IILLVFLGID HYVLLSKIDD YSVAGVILVL LRFSTSLMLA THKG
001: MVYEITEQKK VGLGLIGFGL SFTFLGVILY FDRGLLALGN LFWLIGVGLL LGWQSTWRVF TNVNNLRGTI CFVLGLFLIF VRWPIIGIIL EIYGVIVLFG
101: GFWSTVKAFL SQIPFVGWII QYPLMVSNPQ QHLPFPLMLL SYAFCTFRAS CQGLVLEQHP VLLPQFIQSL VVA
101: GFWSTVKAFL SQIPFVGWII QYPLMVSNPQ QHLPFPLMLL SYAFCTFRAS CQGLVLEQHP VLLPQFIQSL VVA
Arabidopsis Description
Got1/Sft2-like vescicle transport protein family [Source:TAIR;Acc:AT1G05785]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.