Factsheet for HORVU3Hr1G094550.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G044680.1
HORVU1Hr1G066500.1
HORVU1Hr1G076010.1
HORVU1Hr1G081700.1
HORVU2Hr1G006120.3
HORVU2Hr1G020490.1
HORVU2Hr1G023480.3
HORVU2Hr1G114860.1
HORVU2Hr1G119050.2
HORVU2Hr1G119090.2
HORVU3Hr1G026980.2
HORVU3Hr1G039040.6
HORVU3Hr1G071060.1
HORVU4Hr1G051720.1
HORVU4Hr1G073090.1
HORVU5Hr1G057510.3
HORVU5Hr1G104070.1
HORVU7Hr1G029260.1
HORVU7Hr1G049610.2
HORVU7Hr1G115240.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G27390.1	HORVU3Hr1G039040.6	AT3G20000.1	17981999
AT1G27390.1	HORVU4Hr1G051720.1	AT3G20000.1	17981999
AT3G27080.1	HORVU1Hr1G044680.1	AT1G03630.1	21798944
AT3G27080.1	HORVU2Hr1G006120.3	AT1G03630.1	21798944
AT3G27080.1	HORVU2Hr1G020490.1	AT1G03630.1	21798944
AT3G27080.1	HORVU2Hr1G119050.2	AT1G03630.1	21798944
AT3G27080.1	HORVU2Hr1G119090.2	AT1G03630.1	21798944
AT3G27080.1	HORVU4Hr1G073090.1	AT1G03630.1	21798944
AT3G27080.1	HORVU5Hr1G104070.1	AT1G03630.1	21798944
AT3G27080.1	HORVU2Hr1G114860.1	AT1G15760.1	21798944
AT3G27080.1	HORVU7Hr1G029260.1	AT1G15760.1	21798944
AT3G27080.1	HORVU7Hr1G049610.2	AT1G15760.1	21798944
AT3G27080.1	HORVU7Hr1G115240.1	AT1G15760.1	21798944
AT3G27080.1	HORVU1Hr1G081700.1	AT2G20130.1	21798944
AT3G27080.1	HORVU1Hr1G066500.1	AT2G31040.1	21798944
AT3G27080.1	HORVU1Hr1G076010.1	AT3G16310.1	21798944
AT3G27080.1	HORVU3Hr1G026980.2	AT3G16310.1	21798944
AT3G27080.1	HORVU3Hr1G071060.1	AT3G16310.1	21798944
AT3G27080.1	HORVU3Hr1G039040.6	AT3G20000.1	17981999
AT3G27080.1	HORVU4Hr1G051720.1	AT3G20000.1	17981999
AT3G27080.1	HORVU2Hr1G023480.3	AT5G13720.1	21798944
AT5G40930.1	HORVU5Hr1G057510.3	AT2G46550.1	21798944
AT5G40930.1	HORVU3Hr1G039040.6	AT3G20000.1	17981999
AT5G40930.1	HORVU4Hr1G051720.1	AT3G20000.1	17981999

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G075380.6	Barley	cytosol, plastid	38.39	52.44
TraesCS3D01G425100.1	Wheat	cytosol	46.88	50.24
TraesCS3B01G467700.1	Wheat	golgi	46.88	50.24
TraesCS3A01G429800.1	Wheat	cytosol	46.43	49.52
Os01t0921600-01	Rice	mitochondrion, plastid	39.29	43.56
EES01977	Sorghum	cytosol	33.48	36.95
Zm00001d012017_P002	Maize	mitochondrion	33.04	36.63
Zm00001d042329_P001	Maize	extracellular, mitochondrion, plasma membrane, plastid	33.04	36.45
GSMUA_Achr8P00740_001	Banana	cytosol	27.68	36.26
VIT_14s0068g02030.t01	Wine grape	cytosol	28.57	31.84
GSMUA_Achr8P09300_001	Banana	cytosol	27.68	30.85
AT5G40930.1	Thale cress	cytosol	25.45	30.48
GSMUA_AchrUn_...	Banana	cytosol	26.79	29.85
PGSC0003DMT400052223	Potato	cytosol	27.23	29.76
Solyc02g094140.2.1	Tomato	cytosol	26.79	29.41
Solyc02g068130.2.1	Tomato	plastid	26.34	28.92
KRG94268	Soybean	nucleus	26.34	28.23
KRH57705	Soybean	nucleus	26.34	28.1
PGSC0003DMT400056939	Potato	cytosol	20.98	27.81
KRH31475	Soybean	mitochondrion	23.66	26.37
CDY34181	Canola	cytosol	23.21	26.13
Bra032980.1-P	Field mustard	cytosol	23.21	26.13
CDY28496	Canola	cytosol	23.21	25.74
CDX84923	Canola	cytosol	23.66	25.48
CDY27615	Canola	cytosol	23.66	25.0
Bra032826.1-P	Field mustard	cytosol	23.66	25.0
AT1G27390.1	Thale cress	cytosol	23.21	24.76
KRG97423	Soybean	cytosol	23.66	24.42
AT3G27080.1	Thale cress	cytosol	21.88	24.26
PGSC0003DMT400056935	Potato	cytosol	20.09	23.44
CDY03918	Canola	cytosol	21.43	23.08
CDY15710	Canola	cytosol	21.43	22.64
Bra030044.1-P	Field mustard	cytosol	21.43	22.33
CDY11814	Canola	cytosol	20.54	22.12
CDX90082	Canola	cytosol	19.64	21.15
Bra010946.1-P	Field mustard	cytosol	19.2	20.57
CDY35747	Canola	cytosol	9.82	17.19
AT3G27070.2	Thale cress	plasma membrane	17.86	16.13
GSMUA_Achr8P00730_001	Banana	plasma membrane, vacuole	4.02	11.84

Protein Annotations

Gene3D:1.25.40.10	MapMan:23.2.1.5	UniProt:A0A287MD25	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005742
GO:GO:0006810	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0045040
EnsemblPlantsGene:HORVU3Hr1G094550	EnsemblPlants:HORVU3Hr1G094550.2	InterPro:IPR011990	PFAM:PD102047	PFAM:PF06552	PANTHER:PTHR32409
SUPFAM:SSF48452	InterPro:TOM20_imprt_rcpt	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000B470239	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:-:646321525..646326456

Molecular Weight (calculated)

24342.9 Da

IEP (calculated)

8.490

GRAVY (calculated)

-0.483

Length

224 amino acids

Sequence
(BLAST)

001: KRAQISSAPW NGPGTNCRDG PGRVVRFSIS FRKSCRGPTA DALFRWQVGT KFKGPTWQRP RKAARSPPPL PYTTPTTSXE ARPKTLEKPP APPRLAAAPD
101: LAAVAVAVAM DMAAMNDPER LFFFDLACKT AKATYDENPL DADNLTRWGG ALLELSQMHN GPESLKCLED AESKLDEALR IDPNKADALW CLGNALTSRG
201: FFTSETVQAN ECFXKSNWLF PEGC

Best Arabidopsis Sequence Match ( AT5G40930.1 )
(BLAST)

001: MDMQNENERL MVFEHARKVA EATYVKNPLD AENLTRWAGA LLELSQFQTE PKQMILEAIL KLGEALVIDP KKHDALWLIG NAHLSFGFLS SDQTEASDNF
101: EKASQFFQLA VEEQPESELY RKSLTLASKA PELHTGGTAG PSSNSAKTMK QKKTSEFKYD VFGWVILASY VVAWISFANS QTPVSRQ

Arabidopsis Description

TOM20-4Mitochondrial import receptor subunit TOM20-4 [Source:UniProtKB/Swiss-Prot;Acc:P82805]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.