Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G073090.1 | Barley | plastid | 93.44 | 81.43 |
| HORVU5Hr1G104070.1 | Barley | plastid | 84.43 | 80.47 |
| HORVU2Hr1G020490.1 | Barley | plastid | 90.98 | 68.52 |
| HORVU2Hr1G119050.2 | Barley | mitochondrion | 90.98 | 29.6 |
| TraesCS2D01G563600.1 | Wheat | golgi, plastid | 92.62 | 29.12 |
| TraesCS2B01G593000.1 | Wheat | plastid | 91.8 | 28.87 |
| TraesCS2A01G590600.1 | Wheat | plastid | 91.8 | 28.87 |
| Zm00001d001820_P001 | Maize | plastid | 72.13 | 22.74 |
| Os04t0678700-01 | Rice | plastid | 70.49 | 22.22 |
| EES11656 | Sorghum | plastid | 69.67 | 22.08 |
| Bra026349.1-P | Field mustard | plastid | 59.02 | 18.56 |
| GSMUA_Achr3P14270_001 | Banana | plastid | 58.2 | 18.35 |
| Bra019049.1-P | Field mustard | plastid | 59.84 | 18.34 |
| KRH55334 | Soybean | plastid | 59.84 | 18.3 |
| CDX89249 | Canola | plastid | 59.02 | 18.14 |
| CDY29311 | Canola | plastid | 59.02 | 18.14 |
| KRH27209 | Soybean | nucleus, plastid | 59.02 | 18.05 |
| GSMUA_Achr7P04280_001 | Banana | plastid | 58.2 | 17.84 |
| Solyc10g006900.2.1 | Tomato | plastid | 55.74 | 17.22 |
| HORVU1Hr1G044680.1 | Barley | plastid | 55.74 | 17.22 |
| Solyc12g013710.1.1 | Tomato | extracellular, nucleus, plastid | 55.74 | 17.13 |
| PGSC0003DMT400039734 | Potato | plastid | 55.74 | 17.13 |
| PGSC0003DMT400064369 | Potato | plastid | 55.74 | 17.09 |
| AT5G54190.1 | Thale cress | plastid | 56.56 | 17.04 |
| AT4G27440.1 | Thale cress | plastid | 55.74 | 16.96 |
| Bra003004.1-P | Field mustard | plastid | 55.74 | 16.87 |
| CDY14325 | Canola | plastid | 55.74 | 16.83 |
| VIT_12s0059g00270.t01 | Wine grape | plastid | 54.1 | 16.54 |
| CDY18175 | Canola | plastid | 54.1 | 16.5 |
| VIT_19s0014g03160.t01 | Wine grape | plastid | 53.28 | 16.41 |
| Bra033415.1-P | Field mustard | plastid | 53.28 | 16.25 |
| CDX89877 | Canola | plastid | 53.28 | 16.25 |
| PGSC0003DMT400047264 | Potato | plastid | 52.46 | 16.08 |
| CDY15470 | Canola | plastid | 52.46 | 16.08 |
| Solyc07g054210.2.1 | Tomato | plastid | 52.46 | 16.04 |
| AT1G03630.1 | Thale cress | plastid | 52.46 | 15.96 |
| Bra030540.1-P | Field mustard | plastid | 51.64 | 15.83 |
| CDY51384 | Canola | plastid | 51.64 | 15.83 |
| KRH26074 | Soybean | plastid | 43.44 | 15.5 |
| CDY29840 | Canola | plastid | 59.84 | 11.53 |
| CDX92832 | Canola | plastid | 59.02 | 11.3 |
| CDY18309 | Canola | plastid | 22.13 | 7.74 |
| CDX98171 | Canola | plastid | 22.13 | 7.74 |
| HORVU4Hr1G086380.1 | Barley | mitochondrion, plastid | 21.31 | 7.51 |
| HORVU3Hr1G013970.6 | Barley | plastid | 20.49 | 7.04 |
| HORVU5Hr1G075530.8 | Barley | cytosol, nucleus, plastid | 20.49 | 6.44 |
| HORVU7Hr1G011180.12 | Barley | plastid | 17.21 | 5.85 |
| HORVU4Hr1G018230.1 | Barley | plastid | 17.21 | 5.41 |
| TraesCS2D01G563700.1 | Wheat | cytosol | 4.1 | 2.07 |
| HORVU2Hr1G119090.2 | Barley | plastid | 4.92 | 1.42 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G006120.3 | EnsemblPlantsGene:HORVU2Hr1G006120 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016630 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:Prochl_reduct | InterPro:SDR_fam |
| KEGG:00860+1.3.1.33 | PANTHER:PTHR44419 | PANTHER:PTHR44419:SF2 | PFAM:PF00106 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI000B4794EA | UniProt:A0A287GZF0 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:13007903..13008275
Molecular Weight (calculated)
12086.6 Da
IEP (calculated)
10.891
GRAVY (calculated)
0.216
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGSSMGAVA VKDTAAFLGV SSKAKKASLA VRTQVATASS PVTTSPGSTA SSPSGKKTLR QGVVVITGAS SGLGLAAAKA LAETGKWHVV MACRDFLKAS
101: KAAKAAGMAD TSYTVMHLDL AS
101: KAAKAAGMAD TSYTVMHLDL AS
001: MALQAASLVS SAFSVRKDAK LNASSSSFKD SSLFGASITD QIKSEHGSSS LRFKREQSLR NLAIRAQTAA TSSPTVTKSV DGKKTLRKGN VVVTGASSGL
101: GLATAKALAE TGKWNVIMAC RDFLKAERAA KSVGMPKDSY TVMHLDLASL DSVRQFVDNF RRTETPLDVL VCNAAVYFPT AKEPTYSAEG FELSVATNHL
201: GHFLLARLLL DDLKKSDYPS KRLIIVGSIT GNTNTLAGNV PPKANLGDLR GLAGGLNGLN SSAMIDGGDF DGAKAYKDSK VCNMLTMQEF HRRFHEETGV
301: TFASLYPGCI ASTGLFREHI PLFRALFPPF QKYITKGYVS ETESGKRLAQ VVSDPSLTKS GVYWSWNNAS ASFENQLSEE ASDVEKARKV WEISEKLVGL
401: A
101: GLATAKALAE TGKWNVIMAC RDFLKAERAA KSVGMPKDSY TVMHLDLASL DSVRQFVDNF RRTETPLDVL VCNAAVYFPT AKEPTYSAEG FELSVATNHL
201: GHFLLARLLL DDLKKSDYPS KRLIIVGSIT GNTNTLAGNV PPKANLGDLR GLAGGLNGLN SSAMIDGGDF DGAKAYKDSK VCNMLTMQEF HRRFHEETGV
301: TFASLYPGCI ASTGLFREHI PLFRALFPPF QKYITKGYVS ETESGKRLAQ VVSDPSLTKS GVYWSWNNAS ASFENQLSEE ASDVEKARKV WEISEKLVGL
401: A
Arabidopsis Description
PORBProtochlorophyllide reductase B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21218]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.