Factsheet for Bra026349.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89249	Canola	plastid	99.74	97.48
Bra019049.1-P	Field mustard	plastid	96.13	93.72
Bra003004.1-P	Field mustard	plastid	88.14	84.86
KRH27209	Soybean	nucleus, plastid	85.31	82.96
PGSC0003DMT400039734	Potato	plastid	83.76	81.86
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	83.76	81.86
VIT_19s0014g03160.t01	Wine grape	plastid	83.51	81.82
Solyc10g006900.2.1	Tomato	plastid	82.47	81.01
PGSC0003DMT400064369	Potato	plastid	82.99	80.9
KRH55334	Soybean	plastid	81.44	79.2
VIT_12s0059g00270.t01	Wine grape	plastid	80.67	78.45
EER94008	Sorghum	plastid	78.61	77.41
Zm00001d013937_P001	Maize	plastid	78.87	77.27
TraesCS2D01G563700.1	Wheat	cytosol	47.94	77.18
PGSC0003DMT400047264	Potato	plastid	79.12	77.14
Zm00001d032576_P001	Maize	plastid	78.35	76.77
Solyc07g054210.2.1	Tomato	plastid	78.61	76.44
KRH26074	Soybean	plastid	67.01	76.02
GSMUA_Achr3P14270_001	Banana	plastid	75.52	75.71
TraesCS1B01G186300.1	Wheat	plastid	76.8	75.44
HORVU1Hr1G044680.1	Barley	plastid	76.55	75.19
GSMUA_Achr11P...	Banana	plastid	76.55	75.0
Bra033415.1-P	Field mustard	plastid	76.8	74.5
Bra030540.1-P	Field mustard	plastid	76.29	74.37
Os04t0678700-01	Rice	plastid	73.45	73.64
Os10t0496900-02	Rice	plastid	76.29	73.63
TraesCS2A01G590600.1	Wheat	plastid	72.94	72.94
TraesCS2B01G593000.1	Wheat	plastid	72.68	72.68
TraesCS2D01G563600.1	Wheat	golgi, plastid	72.68	72.68
GSMUA_Achr7P04280_001	Banana	plastid	73.71	71.86
EES11656	Sorghum	plastid	71.13	71.69
TraesCS1A01G171000.1	Wheat	golgi, plastid	76.8	71.46
TraesCS1D01G168700.2	Wheat	plastid	76.55	71.22
Zm00001d001820_P001	Maize	plastid	70.1	70.28
HORVU4Hr1G073090.1	Barley	plastid	21.39	59.29
HORVU2Hr1G006120.3	Barley	plastid	18.56	59.02
HORVU5Hr1G104070.1	Barley	plastid	18.81	57.03
HORVU2Hr1G119050.2	Barley	mitochondrion	54.12	56.0
HORVU2Hr1G020490.1	Barley	plastid	22.68	54.32
Bra035220.1-P	Field mustard	cytosol	26.8	32.81
Bra013690.1-P	Field mustard	plastid	26.8	32.1
Bra020819.1-P	Field mustard	cytosol, plastid	26.29	31.68
Bra005188.1-P	Field mustard	cytosol	25.77	31.55
Bra017180.1-P	Field mustard	cytosol	25.77	31.15
Bra009580.1-P	Field mustard	mitochondrion	25.26	29.61
Bra005729.1-P	Field mustard	mitochondrion	24.48	28.7
Bra013757.1-P	Field mustard	cytosol	23.2	27.11
Bra019248.1-P	Field mustard	cytosol	22.94	26.81
Bra027706.1-P	Field mustard	plastid	23.45	26.3
Bra027725.1-P	Field mustard	plastid	23.71	25.99
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	22.68	23.59
Bra029096.1-P	Field mustard	nucleus	22.16	22.75
HORVU2Hr1G119090.2	Barley	plastid	22.68	20.8
Bra022628.1-P	Field mustard	cytosol, mitochondrion	21.39	20.7
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	21.65	20.69
Bra037939.1-P	Field mustard	cytosol	22.16	17.3
Bra027724.1-P	Field mustard	cytosol, plastid	0.0	0.0

Protein Annotations

KEGG:00860+1.3.1.33	Gene3D:3.40.50.720	MapMan:7.12.6.5.1	EnsemblPlantsGene:Bra026349	EnsemblPlants:Bra026349.1	EnsemblPlants:Bra026349.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0015979	GO:GO:0015995	GO:GO:0016491	GO:GO:0016630	GO:GO:0055114	UniProt:M4EC40
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	PANTHER:PTHR44419	PANTHER:PTHR44419:SF3	InterPro:Prochl_reduct
InterPro:SDR_fam	SUPFAM:SSF51735	TIGRFAMs:TIGR01289	UniParc:UPI0002545B12	SEG:seg	:

Description

AT4G27440 (E=5e-187) PORB | PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B); oxidoreductase/ protochlorophyllide reductase

Coordinates

chrA01:+:9868749..9870310

Molecular Weight (calculated)

42017.9 Da

IEP (calculated)

9.737

GRAVY (calculated)

-0.231

Length

388 amino acids

Sequence
(BLAST)

001: MALQAASLVS SAFSVRKDGK LNASSASFKD SSLFGASITE HGSSSLRFKR EHSVRNVAIR AQTAATSSPS ITKSSVDGKK TLRKGNVVVT GASSGLGLAT
101: AKALAETGKW HVIMACRDFL KAERAAKSAG MPKDSYTVMH LDLASLDSVR QFVDNFRRSE MPLDVLVCNA AVYFPTAKEP TYSAEGFELS VATNHLGHFL
201: LSRLLLDDLK KSDYPSKRLI IVGSITGNTN TLAGNVPPKA NLGDLRGLAG GLNGLNSSAM IDGGDFDGAK AYKDSKVCNM LTMQEFHRRY HEETGITFAS
301: LYPGCIASTG LFREHIPLFR TLFPPFQKYI TKGYVSETES GKRLAQVVSD PSLTKSGVYW SWNKASASFE NQLSEEASDV EKARKVWE

Best Arabidopsis Sequence Match ( AT4G27440.1 )
(BLAST)

001: MALQAASLVS SAFSVRKDAK LNASSSSFKD SSLFGASITD QIKSEHGSSS LRFKREQSLR NLAIRAQTAA TSSPTVTKSV DGKKTLRKGN VVVTGASSGL
101: GLATAKALAE TGKWNVIMAC RDFLKAERAA KSVGMPKDSY TVMHLDLASL DSVRQFVDNF RRTETPLDVL VCNAAVYFPT AKEPTYSAEG FELSVATNHL
201: GHFLLARLLL DDLKKSDYPS KRLIIVGSIT GNTNTLAGNV PPKANLGDLR GLAGGLNGLN SSAMIDGGDF DGAKAYKDSK VCNMLTMQEF HRRFHEETGV
301: TFASLYPGCI ASTGLFREHI PLFRALFPPF QKYITKGYVS ETESGKRLAQ VVSDPSLTKS GVYWSWNNAS ASFENQLSEE ASDVEKARKV WEISEKLVGL
401: A

Arabidopsis Description

PORBProtochlorophyllide reductase B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21218]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.