Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G006120.3 | Barley | plastid | 81.43 | 93.44 |
| HORVU5Hr1G104070.1 | Barley | plastid | 82.14 | 89.84 |
| HORVU2Hr1G020490.1 | Barley | plastid | 87.86 | 75.93 |
| TraesCS2D01G563600.1 | Wheat | golgi, plastid | 92.14 | 33.25 |
| TraesCS2B01G593000.1 | Wheat | plastid | 91.43 | 32.99 |
| TraesCS2A01G590600.1 | Wheat | plastid | 91.43 | 32.99 |
| HORVU2Hr1G119050.2 | Barley | mitochondrion | 81.43 | 30.4 |
| Os04t0678700-01 | Rice | plastid | 73.57 | 26.61 |
| Zm00001d001820_P001 | Maize | plastid | 72.86 | 26.36 |
| EES11656 | Sorghum | plastid | 70.71 | 25.71 |
| Bra026349.1-P | Field mustard | plastid | 59.29 | 21.39 |
| GSMUA_Achr3P14270_001 | Banana | plastid | 58.57 | 21.19 |
| Bra019049.1-P | Field mustard | plastid | 60.0 | 21.11 |
| KRH27209 | Soybean | nucleus, plastid | 60.0 | 21.05 |
| CDX89249 | Canola | plastid | 59.29 | 20.91 |
| CDY29311 | Canola | plastid | 59.29 | 20.91 |
| GSMUA_Achr7P04280_001 | Banana | plastid | 59.29 | 20.85 |
| Solyc12g013710.1.1 | Tomato | extracellular, nucleus, plastid | 57.86 | 20.4 |
| PGSC0003DMT400039734 | Potato | plastid | 57.86 | 20.4 |
| KRH55334 | Soybean | plastid | 57.86 | 20.3 |
| HORVU1Hr1G044680.1 | Barley | plastid | 57.14 | 20.25 |
| Solyc10g006900.2.1 | Tomato | plastid | 56.43 | 20.0 |
| PGSC0003DMT400064369 | Potato | plastid | 56.43 | 19.85 |
| AT5G54190.1 | Thale cress | plastid | 57.14 | 19.75 |
| AT4G27440.1 | Thale cress | plastid | 56.43 | 19.7 |
| Bra003004.1-P | Field mustard | plastid | 55.71 | 19.35 |
| CDY14325 | Canola | plastid | 55.71 | 19.31 |
| VIT_12s0059g00270.t01 | Wine grape | plastid | 55.0 | 19.3 |
| CDY18175 | Canola | plastid | 55.0 | 19.25 |
| VIT_19s0014g03160.t01 | Wine grape | plastid | 54.29 | 19.19 |
| Bra033415.1-P | Field mustard | plastid | 54.29 | 19.0 |
| CDX89877 | Canola | plastid | 54.29 | 19.0 |
| CDY15470 | Canola | plastid | 53.57 | 18.84 |
| AT1G03630.1 | Thale cress | plastid | 53.57 | 18.7 |
| Bra030540.1-P | Field mustard | plastid | 52.86 | 18.59 |
| CDY51384 | Canola | plastid | 52.86 | 18.59 |
| PGSC0003DMT400047264 | Potato | plastid | 52.14 | 18.34 |
| Solyc07g054210.2.1 | Tomato | plastid | 52.14 | 18.3 |
| KRH26074 | Soybean | plastid | 42.14 | 17.25 |
| CDY29840 | Canola | plastid | 60.0 | 13.27 |
| CDX92832 | Canola | plastid | 59.29 | 13.03 |
| CDY18309 | Canola | plastid | 25.71 | 10.32 |
| CDX98171 | Canola | plastid | 25.71 | 10.32 |
| HORVU3Hr1G013970.6 | Barley | plastid | 22.14 | 8.73 |
| HORVU4Hr1G086380.1 | Barley | mitochondrion, plastid | 21.43 | 8.67 |
| HORVU5Hr1G075530.8 | Barley | cytosol, nucleus, plastid | 21.43 | 7.73 |
| HORVU7Hr1G011180.12 | Barley | plastid | 17.86 | 6.96 |
| HORVU4Hr1G018230.1 | Barley | plastid | 17.86 | 6.44 |
| TraesCS2D01G563700.1 | Wheat | cytosol | 8.57 | 4.98 |
| HORVU2Hr1G119090.2 | Barley | plastid | 5.0 | 1.65 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G073090.1 | EnsemblPlantsGene:HORVU4Hr1G073090 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016630 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:Prochl_reduct | InterPro:SDR_fam |
| KEGG:00860+1.3.1.33 | PANTHER:PTHR44419 | PANTHER:PTHR44419:SF2 | PFAM:PF00106 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI000B488399 | UniProt:A0A287PNI3 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:587959602..587960524
Molecular Weight (calculated)
14265.5 Da
IEP (calculated)
10.680
GRAVY (calculated)
0.260
Length
140 amino acids
Sequence
(BLAST)
(BLAST)
001: MALQLLPSTL SVPKKGSSMG AVVVKDTAAF LGVSSKAKKA SLAVRTQVAT ASSPMTMSPG STASSPSGKK TLRQGVVVIT GASSGLGLAA AKALAETGKW
101: HVVMACRDFL KASKAAGMAD TSYTVMHLDL ASLDMEWTFS
101: HVVMACRDFL KASKAAGMAD TSYTVMHLDL ASLDMEWTFS
001: MALQAAYSLL PSTISIQKEG KFNASLKETT FTGSSFSNHL RAEKISTLLT IKRRQKPRFS TGIRAQTVTA TPPANEASPE QKKTERKGTA VITGASSGLG
101: LATAKALADT GKWHVIMACR NFLKAEKAAR SVGMSKEDYT VMHLDLASLE SVKQFVENFR RTEQPLDVLV CNAAVYQPTA KEPSFTAEGF EISVGTNHLG
201: HFLLSRLLLD DLKKSDYPSK RMIIVGSITG NTNTLAGNVP PKANLGDLRG LASGLNGQNS SMIDGGEFDG AKAYKDSKVC NMLTMQELHR RYHEETGVTF
301: ASLYPGCIAT TGLFREHIPL FRLLFPPFQK YITKGYVSEE EAGKRLAQVV SDPSLGKSGV YWSWNNNSSS FENQLSKEAS DAEKAKKLWE VSEKLVGLA
101: LATAKALADT GKWHVIMACR NFLKAEKAAR SVGMSKEDYT VMHLDLASLE SVKQFVENFR RTEQPLDVLV CNAAVYQPTA KEPSFTAEGF EISVGTNHLG
201: HFLLSRLLLD DLKKSDYPSK RMIIVGSITG NTNTLAGNVP PKANLGDLRG LASGLNGQNS SMIDGGEFDG AKAYKDSKVC NMLTMQELHR RYHEETGVTF
301: ASLYPGCIAT TGLFREHIPL FRLLFPPFQK YITKGYVSEE EAGKRLAQVV SDPSLGKSGV YWSWNNNSSS FENQLSKEAS DAEKAKKLWE VSEKLVGLA
Arabidopsis Description
PORCProtochlorophyllide reductase C, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48741]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.