CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98171	Canola	plastid	99.71	99.71
CDY14325	Canola	plastid	95.99	82.92
AT5G54190.1	Thale cress	plastid	89.97	77.53
TraesCS2D01G563700.1	Wheat	cytosol	52.44	75.93
CDX89249	Canola	plastid	82.23	72.29
CDY29311	Canola	plastid	81.66	71.79
KRH27209	Soybean	nucleus, plastid	79.94	69.92
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	78.8	69.27
VIT_19s0014g03160.t01	Wine grape	plastid	77.94	68.69
Solyc10g006900.2.1	Tomato	plastid	77.65	68.61
PGSC0003DMT400039734	Potato	plastid	77.94	68.51
PGSC0003DMT400064369	Potato	plastid	77.94	68.34
VIT_12s0059g00270.t01	Wine grape	plastid	76.79	67.17
KRH55334	Soybean	plastid	75.36	65.91
PGSC0003DMT400047264	Potato	plastid	74.21	65.08
Solyc07g054210.2.1	Tomato	plastid	74.21	64.91
KRH26074	Soybean	plastid	63.61	64.91
CDX89877	Canola	plastid	74.21	64.75
CDY18175	Canola	plastid	74.21	64.75
CDY51384	Canola	plastid	73.35	64.32
CDY15470	Canola	plastid	73.35	64.32
EER94008	Sorghum	plastid	71.92	63.71
TraesCS1B01G186300.1	Wheat	plastid	71.92	63.54
Zm00001d013937_P001	Maize	plastid	71.92	63.38
HORVU1Hr1G044680.1	Barley	plastid	71.63	63.29
Zm00001d032576_P001	Maize	plastid	71.63	63.13
GSMUA_Achr11P...	Banana	plastid	71.63	63.13
GSMUA_Achr3P14270_001	Banana	plastid	69.91	63.05
Os10t0496900-02	Rice	plastid	71.35	61.94
Os04t0678700-01	Rice	plastid	68.48	61.76
TraesCS2A01G590600.1	Wheat	plastid	68.19	61.34
TraesCS2D01G563600.1	Wheat	golgi, plastid	68.19	61.34
TraesCS2B01G593000.1	Wheat	plastid	67.91	61.08
EES11656	Sorghum	plastid	67.05	60.78
TraesCS1A01G171000.1	Wheat	golgi, plastid	71.92	60.19
GSMUA_Achr7P04280_001	Banana	plastid	68.48	60.05
TraesCS1D01G168700.2	Wheat	plastid	71.63	59.95
Zm00001d001820_P001	Maize	plastid	65.62	59.17
CDX92832	Canola	plastid	81.09	44.43
CDY29840	Canola	plastid	79.66	43.92
HORVU2Hr1G119050.2	Barley	mitochondrion	46.42	43.2
HORVU5Hr1G104070.1	Barley	plastid	10.89	29.69
CDY68648	Canola	cytosol	16.33	27.27
CDX74954	Canola	cytosol	24.93	27.19
CDY13264	Canola	cytosol	24.64	27.13
CDX86777	Canola	cytosol	24.64	27.13
CDX81232	Canola	cytosol	24.93	27.1
CDY52817	Canola	cytosol	24.64	26.88
CDY52816	Canola	cytosol	24.64	26.88
CDY18436	Canola	cytosol	24.64	26.79
CDY10884	Canola	plastid	24.64	26.71
CDX76338	Canola	cytosol, plastid	24.64	26.71
CDY69917	Canola	endoplasmic reticulum	22.92	26.23
HORVU4Hr1G073090.1	Barley	plastid	10.32	25.71
HORVU2Hr1G020490.1	Barley	plastid	11.75	25.31
CDY10440	Canola	plastid	23.21	24.92
CDY11217	Canola	mitochondrion	22.92	24.17
CDY40365	Canola	mitochondrion	22.92	24.17
CDY44096	Canola	mitochondrion, plastid	24.36	23.55
CDX76323	Canola	cytosol	22.06	23.19
CDY10985	Canola	cytosol	22.06	23.19
CDY55418	Canola	cytosol	19.77	23.08
CDY50440	Canola	mitochondrion	21.78	22.42
CDX88292	Canola	cytosol	10.03	22.29
HORVU2Hr1G006120.3	Barley	plastid	7.74	22.13
CDY53433	Canola	plastid	22.06	22.13
CDY64354	Canola	cytosol	14.04	21.59
CDX92838	Canola	cytosol	19.48	21.25
CDY72089	Canola	cytosol	11.75	20.4
CDY72311	Canola	cytosol	11.75	20.3
CDX71585	Canola	mitochondrion	19.48	20.06
CDY53896	Canola	plastid	11.46	20.0
HORVU2Hr1G119090.2	Barley	plastid	23.78	19.62
CDX89228	Canola	cytosol, nucleus, peroxisome	20.34	19.03
CDY19025	Canola	cytosol	20.06	18.77
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	18.05	17.21
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	6.02	15.33
CDY27027	Canola	golgi, mitochondrion, nucleus	19.48	15.18
CDX96191	Canola	mitochondrion	18.62	14.77
CDY70072	Canola	cytosol	6.3	13.17
CDY37755	Canola	mitochondrion, plastid	20.34	11.4
CDY08387	Canola	cytosol, nucleus, plastid	22.35	8.75
CDY47833	Canola	cytosol, nucleus, plastid	21.78	8.53
CDY38726	Canola	cytosol, golgi, plastid	19.77	8.29

Protein Annotations

KEGG:00860+1.3.1.33	Gene3D:3.40.50.720	MapMan:7.12.6.5.1	GO:A0A078FYR0	UniProt:A0A078FYR0	EnsemblPlants:CDY18309
ProteinID:CDY18309	ProteinID:CDY18309.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016491	GO:GO:0016630
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00002877001	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR44419	PANTHER:PTHR44419:SF3	InterPro:Prochl_reduct
SUPFAM:SSF51735	TIGRFAMs:TIGR01289	UniPathway:UPA00668	UniParc:UPI0004EE149B	SEG:seg	:

Description

BnaC09g30590DBnaC09g30590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FYR0]

Coordinates

chrLK032084:-:256249..258082

Molecular Weight (calculated)

38208.7 Da

IEP (calculated)

10.377

GRAVY (calculated)

-0.250

Length

349 amino acids

Sequence
(BLAST)

001: MALQAASLVS SVRKDGKSNA SSSLKESSLF GASLSDQIKA DLVSFSLRCK REQRLRTTGA KIRAQTIVTS TPSVTRSTFD RKKTLRKGNV VVTGASSGLS
101: VRQFVDNFRR AEMPLDVLVC NAAIYQPMAN KPTFTAEGFE LSVGTNHLGH FLLSRLLIDD LKNSDYPSKR LIIVGSITGN TNTLAGNVLP KANLGDLRGL
201: ASGLNGRNNS AMIDGGDFNG AKAYKDSKVC NMLTMQEFHR RFREETGITF ASLYPGCIAT TGLFREHITL FRSLFPLFQK YITKGYVPEA EAGKRLAQVV
301: GDPNLTKSGV YWSWNKTSAS FENQLSQEAS DVEKARRVWE VSEKLVGLA

Best Arabidopsis Sequence Match ( AT1G03630.2 )
(BLAST)

001: MALQAAYSLL PSTISIQKEG KFNASLKETT FTGSSFSNHL RAEKISTLLT IKRRQKPRFS TGIRAQTVTA TPPANEASPE QKKTERKGTA VITGASSGLG
101: LATAKALADT GKWHVIMACR NFLKAEKAAR SVGMSKEDYT VMHLDLASLE SVKQFVENFR RTEQPLDVLV CNAAVYQPTA KEPSFTAEGF EISVGTNHLG
201: HFLLSRLLLD DLKKSDYPSK RMIIVGSITG NTNTLAGNVP PKANLGDLRG LASGLNGQNS SMIDGGEFDG AKAYKDSKVC NMLTMQELHR RYHEETGVTF
301: ASLYPGCIAT TGLFREHIPL FRLLFPPFQK YITKGYVSEE EAGKRLAQVV SDPSLGKSGV YWSWNNNSSS FENQLSKEAS DAEKAKKLWE VSEKLVGLA

Arabidopsis Description

PORCProtochlorophyllide reductase C, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48741]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.